Pairwise Alignments

Query, 187 a.a., DNA-directed RNA polymerase from Methanococcus maripaludis S2

Subject, 142 a.a., 3'-to-5' exoribonuclease RNase R from Variovorax sp. SCN45

 Score = 56.2 bits (134), Expect = 2e-13
 Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 2/72 (2%)

Query: 86  DGEIVDVVEFGAFVRL--GPLDGLIHISQIMDDFVSFDPKREAIIGKETGKVLEKGDKVR 143
           DG I  V  FG F+ L    ++GL+H++Q+  D+  FDP R+ + G+ TG+    GD+VR
Sbjct: 42  DGVISGVTSFGLFIELDDSKVNGLVHVTQLPHDYYHFDPIRKTLSGERTGREYRLGDRVR 101

Query: 144 ARIVAVSLREEK 155
             ++  S+ + K
Sbjct: 102 IVVLKASVEDRK 113