Pairwise Alignments

Query, 187 a.a., DNA-directed RNA polymerase from Methanococcus maripaludis S2

Subject, 773 a.a., 3'-to-5' exoribonuclease RNase R from Variovorax sp. SCN45

 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 81  LQEVVDGEIVDVVEFGAFVRLGPL--DGLIHISQIMDDFVSFDPKREAIIGKETGKVLEK 138
           L E   G +     FG FV L  +  +GL+HI+++  ++  FD  R+ + G+ TG     
Sbjct: 611 LGEEYGGVVTAATTFGIFVTLDAMYVEGLVHITELGGEYFKFDEMRQELRGERTGIRYAI 670

Query: 139 GDKVRARIVAVSLREEK 155
           G +VR ++  V L   K
Sbjct: 671 GTRVRVQVSRVDLDGRK 687