Pairwise Alignments

Query, 187 a.a., DNA-directed RNA polymerase from Methanococcus maripaludis S2

Subject, 787 a.a., RNA-binding transcriptional accessory protein from Magnetospirillum magneticum AMB-1

 Score = 48.1 bits (113), Expect = 4e-10
 Identities = 29/86 (33%), Positives = 50/86 (58%), Gaps = 17/86 (19%)

Query: 84  VVDGEIVDVVEFGAFVRLGP-LDGLIHISQIMDDFVSFDPKREAIIGKETGKVLEKGDKV 142
           +++G + +V  FGAFV +G   DGL+HIS + D FV           K+  +V++ GD V
Sbjct: 667 ILEGVVTNVTNFGAFVDIGVHQDGLVHISVLADRFV-----------KDPHEVVKPGDLV 715

Query: 143 RARIVAVSLREEKKRGSKIALTMRQN 168
           + +++ V ++      S+IAL+MR +
Sbjct: 716 KVKVLEVDIKR-----SRIALSMRMD 736