Pairwise Alignments

Query, 187 a.a., DNA-directed RNA polymerase from Methanococcus maripaludis S2

Subject, 813 a.a., putative enzyme (VIMSS) from Escherichia coli BW25113

 Score = 57.8 bits (138), Expect = 5e-13
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 2/95 (2%)

Query: 80  ELQEVVDGEIVDVVEFGAFVRLGPL--DGLIHISQIMDDFVSFDPKREAIIGKETGKVLE 137
           ++  V  G I  V  FG FVRL  L  DGL+H+S + +D+  FD   + ++G+ +G+   
Sbjct: 642 QVGNVFKGVISSVTGFGFFVRLDDLFIDGLVHVSSLDNDYYRFDQVGQRLMGESSGQTYR 701

Query: 138 KGDKVRARIVAVSLREEKKRGSKIALTMRQNGLGR 172
            GD+V  R+ AV++ E K   S I+       +G+
Sbjct: 702 LGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGK 736