Pairwise Alignments

Query, 187 a.a., DNA-directed RNA polymerase from Methanococcus maripaludis S2

Subject, 778 a.a., RNA-binding transcriptional accessory protein from Dickeya dianthicola ME23

 Score = 48.1 bits (113), Expect = 4e-10
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 17/84 (20%)

Query: 84  VVDGEIVDVVEFGAFVRLGP-LDGLIHISQIMDDFVSFDPKREAIIGKETGKVLEKGDKV 142
           +++G + +V  FGAFV +G   DGL+HIS + D FV  DP           +V++ GD V
Sbjct: 652 ILEGAVTNVTNFGAFVDIGVHQDGLVHISSLADRFVE-DPH----------QVVKAGDIV 700

Query: 143 RARIVAVSLREEKKRGSKIALTMR 166
           + +++ V L+ +     +IALTMR
Sbjct: 701 KVKVLEVDLQRK-----RIALTMR 719