Pairwise Alignments

Query, 187 a.a., DNA-directed RNA polymerase from Methanococcus maripaludis S2

Subject, 713 a.a., polyribonucleotide nucleotidyltransferase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score = 48.5 bits (114), Expect = 3e-10
 Identities = 45/168 (26%), Positives = 78/168 (46%), Gaps = 20/168 (11%)

Query: 8   SDTVRIPPKMFGNPLSENVKRVLMEKYEGILDKDIGFILSIVDVDNVSDGSIIYGDGAAY 67
           S  + IP ++ G  +    K V+ E     + KD G  + I +VDN    +I   +  + 
Sbjct: 561 SYNMTIPKELIGAVIGPGGK-VIQE-----IQKDTGATIVIEEVDNAGKINIFSNNQESM 614

Query: 68  HETEFNVLTYV--PELQEVVDGEIVDVVEFGAFVRLGP-LDGLIHISQIMDDFVSFDPKR 124
                 +   V  PE+ E   G++ +++ FGAFV   P  DGL+HIS+I         K 
Sbjct: 615 DSAIGRIKAIVAQPEIGETYTGKVKNIMPFGAFVEFMPGKDGLLHISEI---------KW 665

Query: 125 EAIIGKETGKVLEKGDKVRARIVAVSLREEKKRGSKIALTMRQNGLGR 172
           E +  +    VLE G+++  +++ V  +  K + S+ AL  +    G+
Sbjct: 666 ERL--ENMDGVLEPGEEIMVKLIDVDKKTGKFKLSRKALLPKPEKSGK 711