Pairwise Alignments

Query, 187 a.a., DNA-directed RNA polymerase from Methanococcus maripaludis S2

Subject, 774 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 53.9 bits (128), Expect = 7e-12
 Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 25/107 (23%)

Query: 72  FNVLTYVPELQEVVD--------GEIVDVVEFGAFVRLGP-LDGLIHISQIMDDFVSFDP 122
           F   T+   + E+ D        G + +V  FGAFV +G   DGL+H+SQ+ D FV    
Sbjct: 636 FKTATFADGVDEITDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFV---- 691

Query: 123 KREAIIGKETGKVLEKGDKVRARIVAVSLREEKKRGSKIALTMRQNG 169
                  K+  +V++ GD V+ R+V V ++ +     +I LTMR++G
Sbjct: 692 -------KDPHEVVKAGDVVKVRVVEVDVKRK-----RIGLTMRKDG 726