Pairwise Alignments

Query, 304 a.a., dihydroorotate dehydrogenase from Methanococcus maripaludis S2

Subject, 436 a.a., NAD-dependent dihydropyrimidine dehydrogenase subunit PreA (EC 1.3.1.1) from Variovorax sp. SCN45

 Score =  107 bits (268), Expect = 4e-28
 Identities = 91/307 (29%), Positives = 136/307 (44%), Gaps = 32/307 (10%)

Query: 9   IEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGIEKKPGHNNPTMVEVEGGFLNA 68
           I   NP +LA+    +    + R  + G G V  K+VG        +P +V V G     
Sbjct: 11  IRSPNPFWLASAPPTDKEINVVRAFEAGWGGVVWKTVG-------EDPNVVNVHGPRYAV 63

Query: 69  MGLPNPGADEYAGEIERIKDEMKRMNVK-------------IIGSIYGKNDSEFQK--AA 113
               +     +   IE I D   R N++             ++ S+      E  K    
Sbjct: 64  SYAADRRVTGF-NNIELISDRPLRTNLEEMTRVKRNWPDRALVASVMVPCTEESWKNILP 122

Query: 114 EIIGNYVDVLELNISCPHAGG--GYGSSIGQDPYLCKNVVSAVKDVSDIPVIAKLTPNVT 171
            I     D LELN  CPH     G G+++GQ P   + V    K  S +P+I KLTPNV 
Sbjct: 123 MIEDTGCDGLELNFGCPHGMSERGMGAAVGQVPEYIQMVAEWCKHYSKLPLIVKLTPNVA 182

Query: 172 DIKEIANAVVNAGADGIVAINTLGPGMVIDIESGV--PILG--NRVGGMSGKAVKPIAVK 227
           DI+  A A    GAD +  INT+   M +D+++    P  G     GG  G   KPIA+ 
Sbjct: 183 DIRPAARAAKKGGADAVSLINTINSIMGVDLDAMAMFPNTGGMGSHGGYCGPGAKPIALH 242

Query: 228 NVYDIC---SAVDVPVIGVGGITTGADAIEFMMAGASAVQVGTGVYYRGYDIFQKINNEI 284
            V +I        +P+ G+GG++T  DA EF+  G+ +VQV T     G+ I Q + + +
Sbjct: 243 MVAEIARDPQTAGLPISGIGGVSTWRDAAEFIALGSGSVQVCTAAMVYGFKIVQDLCDGL 302

Query: 285 EEYLLKK 291
             ++ +K
Sbjct: 303 SNFMDEK 309