Pairwise Alignments

Query, 304 a.a., dihydroorotate dehydrogenase from Methanococcus maripaludis S2

Subject, 316 a.a., Dihydroorotate dehydrogenase (NAD(+)), catalytic subunit (EC 1.3.1.14) from Variovorax sp. SCN45

 Score =  169 bits (428), Expect = 8e-47
 Identities = 110/287 (38%), Positives = 159/287 (55%), Gaps = 9/287 (3%)

Query: 2   LKTKLWDIEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGIEKKPGHNNPTMVEV 61
           L  ++ ++E +NPV  A+G      S  + +  N  GA+  KSV    + G+  P + E 
Sbjct: 4   LNIRIGELELRNPVMPASGCFAIEYS--EALDLNRLGALVVKSVSPVSRAGNPTPRVAEA 61

Query: 62  EGGFLNAMGLPNPGADEYAGEIERIKDEMKRMNVKIIGSIYGKNDSEFQKA-AEIIGNYV 120
             G LN++G+P+ G D Y  E+          +  ++ SI      EF +A AE+    V
Sbjct: 62  HAGMLNSIGIPSKGLDYYRREV---LPAYTGFDTPVVVSISADTVDEFAEAVAEMSLPEV 118

Query: 121 DVLELNISCPHAGGGYGSSIGQDPYLCKNVVSAVKDVSDIPVIAKLTPNVTDIKEIANAV 180
            V+E NISCP+     G +    P     VVSA++  +  P  AKLTPN + I  +A A 
Sbjct: 119 AVIEANISCPNLEAD-GMAFAMTPETTYKVVSAIRRKTRHPFWAKLTPNASHIAAVAKAA 177

Query: 181 VNAGADGIVAINTLGPGMVIDIESGVPILGNRVGGMSGKAVKPIAVKNVYDICSAVDVPV 240
             AGAD +V  NT+  GM ID+ +  P LGN +GG+SG A+KPIA++ V+    +V +PV
Sbjct: 178 EEAGADALVMGNTV-LGMAIDVRTRKPRLGNVMGGLSGPAIKPIALRMVHQCYRSVRIPV 236

Query: 241 IGVGGITTGADAIEFMMAGASAVQVGTGVYYRGYDIFQKINNEIEEY 287
           IG GGI +  DA+EFM+AGASAVQVGT  +     + QKI + +E Y
Sbjct: 237 IGCGGICSADDAVEFMLAGASAVQVGTASFI-DPGVMQKIIDGLEAY 282