Pairwise Alignments

Query, 304 a.a., dihydroorotate dehydrogenase from Methanococcus maripaludis S2

Subject, 355 a.a., quinone-dependent dihydroorotate dehydrogenase from Magnetospirillum magneticum AMB-1

 Score =  100 bits (250), Expect = 4e-26
 Identities = 86/311 (27%), Positives = 142/311 (45%), Gaps = 31/311 (9%)

Query: 2   LKTKLWDIEFKNPVFLAAGVMGETGSALKRMAKNGAGAVCTKSVGIEKKPGHNNPTMVEV 61
           LK +LW  +F NPV LAAG   +       M   G G V   SV    +PG+  P M  +
Sbjct: 43  LKVRLWGRDFANPVGLAAG-FDKNAEVPDAMLAQGFGFVEIGSVTPRPQPGNPKPRMFRL 101

Query: 62  --EGGFLNAMGLPNPGADEYAGEIERIKDEMKRMNVKIIGSIYGKND------SEFQKAA 113
             +   +N MG  N G +  A  +        R    I+G+  GKN       ++++K A
Sbjct: 102 PEDRAVINRMGFNNQGLEAVAARLAA------RPRTGIVGANLGKNKDTEDAAADYEKGA 155

Query: 114 EIIGNYVDVLELNISCPHAGGGYGSSIGQDPY-----LCKNVVSAVKDVSDIPVIAKLTP 168
             +    D L +N+S P+  G   +  G+D         +  ++A       P++ K+ P
Sbjct: 156 ARLAPLSDYLVINVSSPNTPG-LRALQGRDQLESLVGRTRAALTAAMPSGAPPLLLKIAP 214

Query: 169 NVT--DIKEIANAVVNAGADGIVAINTLGPGMVIDIESGVPILGNRVGGMSGKAV---KP 223
           ++   D+ +IA   +    DG++  NT     V   ES       + GG+SG  +     
Sbjct: 215 DLAWEDLSDIAAVALEGALDGLIVSNTT----VARPESLRSANAGQTGGLSGAPLFESST 270

Query: 224 IAVKNVYDICSAVDVPVIGVGGITTGADAIEFMMAGASAVQVGTGVYYRGYDIFQKINNE 283
             ++ VY++     +P+IGVGGI +G++A   + AGAS VQV + + Y G  +  +I +E
Sbjct: 271 AMLRRVYELTRG-KLPIIGVGGIASGSEAYAKIRAGASLVQVYSAMVYEGPALITRIKHE 329

Query: 284 IEEYLLKKDLK 294
           + + L +   K
Sbjct: 330 MVDLLARDGFK 340