Pairwise Alignments

Query, 433 a.a., MBL fold metallo-hydrolase from Methanococcus maripaludis S2

Subject, 466 a.a., Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  146 bits (369), Expect = 1e-39
 Identities = 125/441 (28%), Positives = 208/441 (47%), Gaps = 50/441 (11%)

Query: 5   FRGGASEVGRSCVELKTEKSTVLFDCGVKLSHEE------SEYPILDNLNADCVFASHAH 58
           F GGA  V  S   L+ +K+ +L DCG+    +E        +PI      D V  +HAH
Sbjct: 7   FLGGAQTVTGSRYLLEIDKTKILIDCGLFQGIKELRKRNWDPFPI-SAAAIDMVLLTHAH 65

Query: 59  LDHTGGIPLLIRKGMVPAIYATEVTKAISKELLRDSIKIAGAEGQDIP------------ 106
           +DH+G +P L+++G    I  TE T  + K LL D+ K+   E +               
Sbjct: 66  IDHSGYLPKLVKEGFKGPILLTEPTMDLVKTLLLDAGKLQEEEAEYAKRKGFSKHEDPSP 125

Query: 107 -YDKADVNKSLNLFRKARYNHPKDFKD-FEFEFFNAGHIPGSSTISL----NYGGKRVVY 160
            Y   D  +  +      ++ P           +NAGHI G++ + +    N+  K +V+
Sbjct: 126 LYTMEDAEEVFDQLSPISFDQPISLTPKATLTAYNAGHILGAAILKIQVRGNHQTKTIVF 185

Query: 161 TGDTKVSDTDLVKGADLSYTKEDIACLIVESTYGDKNQENREDAEKNFINKIKETLERGG 220
           +GD     TD +    +   K DI  L +ESTYG+++ E     EK     I ET ++GG
Sbjct: 186 SGDLG-RYTDPLLNPPIGLPKADI--LFIESTYGNRSHETN-GPEKLLAGAINETYQKGG 241

Query: 221 IPLVPVFAVDRSQEILMILNKHDFG-----VPVYFDG-MGRKITRIMLQYPKFLNHPDDL 274
           + ++P FAV R+Q +L  L K         +P+Y D  M   +T++   +  +      L
Sbjct: 242 VAVIPAFAVGRTQLVLYYLYKLQQKGMIPQIPIYVDSPMAIDVTKLYKDHLAYHRLGPSL 301

Query: 275 KA------AFLNVIEVESKDRPKIIKDIKQNGGIIVSTAGMLEGGPIIPYIHEFMEDPKN 328
           +       +  N+   +S++    + +I+ +  II+S +GM  GG I+ +++  + +  +
Sbjct: 302 QEDGTNPFSHKNLHYYQSQEASMSLNNIRGDA-IIISASGMATGGRILHHLYNRLPNEND 360

Query: 329 SLIFTGYQVEETAGRKLLE-TGKIEIGEFDIEPKLEIASYQ-FSAHGEMDELRE----IV 382
           S+IF GYQ + T GRKLL+   ++ +   D+  K  I      SAH + DEL      I 
Sbjct: 361 SIIFVGYQAKGTRGRKLLDGEERVRMYGIDVPAKASIHYIDGLSAHADQDELLRWADCIA 420

Query: 383 KKANPEVLVIQHGEEEVVKIF 403
           +K  P++  + HGE+EV   F
Sbjct: 421 EK--PKLTFVVHGEQEVSAAF 439