Pairwise Alignments

Query, 315 a.a., replication factor C small subunit from Methanococcus maripaludis S2

Subject, 684 a.a., DNA polymerase III subunit gamma/tau from Pseudomonas simiae WCS417

 Score = 89.0 bits (219), Expect = 3e-22
 Identities = 71/224 (31%), Positives = 114/224 (50%), Gaps = 24/224 (10%)

Query: 8   KYRPETLSEVVGHHEIIKRLTNYVEKKSMPHL-LFSGSPGVGKTTAALALAKDLYGDTWR 66
           K+RP +  E+VG   ++K L N ++ + + H  LF+G+ GVGKTT A  +AK L  +T  
Sbjct: 9   KWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAKCLNCETGI 68

Query: 67  ENF------LELNSSDERGIDVI------RTKVKDFARTKPIGD----AP----FKVIFL 106
            +       +     + R +D+I      RTKV+D   T+ + D    AP    FKV  +
Sbjct: 69  TSTPCGTCSVCKEIDEGRFVDLIEIDAASRTKVED---TRELLDNVQYAPSRGRFKVYLI 125

Query: 107 DESDALTSDAQNALRRTMEKYSDICRFILSCNYPSKIIPPIQSRCAIFRFSPLKTEDLVE 166
           DE   L+S + NAL +T+E+     +FIL+   P K+   I SRC  F    +  E +VE
Sbjct: 126 DEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTPERVVE 185

Query: 167 NLKDISEKENLNLEKGGIDAIIYVSEGDMRKAINVLQTAAAVSD 210
           +L  +   EN+  E   +  +   ++G MR A+++   A A  +
Sbjct: 186 HLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGE 229