Pairwise Alignments

Query, 503 a.a., sodium-dependent transporter from Methanococcus maripaludis S2

Subject, 473 a.a., Na+-dependent transporters of the SNF family protein from Alteromonas macleodii MIT1002

 Score =  214 bits (544), Expect = 7e-60
 Identities = 145/476 (30%), Positives = 249/476 (52%), Gaps = 52/476 (10%)

Query: 2   AREQWASKMGFILAAVGSAVGLGNIWRFPYMAYENGGGAFLIPYFVALLFVGIMVMVLEL 61
           AREQ+ S++GFILAA GSAVG+GN+  FP  A +NGGGAFL+ Y + +  + + VM+ E+
Sbjct: 4   AREQFGSRIGFILAAAGSAVGIGNLVGFPVGAAKNGGGAFLLMYAIFVFAICLPVMLAEM 63

Query: 62  ALGHSTKGSAPLALRRLG---KNFEWIGWLAIATAFIITTYYTAIIAWALVYLVK----- 113
           ++G   K     A   +    K ++  GWLAIAT F+I  +Y  I  W   YL +     
Sbjct: 64  SVGRHAKKDPLGAYSDISGNEKKWKVAGWLAIATPFMIAVFYMVITVWLFGYLFEAVSGN 123

Query: 114 LFMVGFPTDFGGFFFSDILALSSGHGDLGGFNLPILVGLALIWGVNYIVVNSGVRKGLEK 173
           L  +  P  FG F  S+                 I + +A + GV Y+++  GV++G+EK
Sbjct: 124 LDKLANPETFGLFINSE----------------AIFLYMAAVVGVVYLILQGGVKEGIEK 167

Query: 174 ANEILMPVLFFLILALVVRSITLPGGLMGIEYYLTPNFAVLLTPKVWIDAFSQIFFTLSL 233
           A ++LMP LF +++ LV+  +T    + G+E+Y+ P F+  +T +V   A SQ FF+LSL
Sbjct: 168 AAKLLMPALFVMLIGLVIFVLTRENAMAGVEFYIVPEFS-KITAEVVNGALSQAFFSLSL 226

Query: 234 GFGIMVAYSSYLPKKSDLTASAFTISLMNCGFSFLAGFAVFGTLGYMAMTQGVPISEVVT 293
           G GI++ Y SY+ K++D+ ++A  ++L +   +F AG  +   +   +    +   ++  
Sbjct: 227 GMGILITYGSYIDKRADVPSAAKLVALTDTAVAFTAGLMILPAI--FSFNPDINPDDLSE 284

Query: 294 QSIGLAFVAFPQALSLMP------GGIILAAIFFIALFVAGISSSVSLVESTASAVIDKF 347
            S+G+ F   P     +       G  I+A++FF+ +F A I+S VS+ E   +A++D+ 
Sbjct: 285 SSVGMIFTYLPSIFLALQDSIGYMGASIVASLFFLLVFFAAITSLVSIFEVPVAALMDEK 344

Query: 348 NLPRHKAASAVIATSFFASLIYATNAG-LYWLDSVDHY-------------INWFTI-PL 392
            + R  A  ++ +     +++ A + G +  L S  HY             + + TI PL
Sbjct: 345 GVSRKWALGSLGSIMILLAILSALSFGKVDMLTSFMHYAGADKSLFDVIYDVFYDTILPL 404

Query: 393 VAVLEIIVSIWIFKGSKLEKYIDNLSEYNLGSFWKFFAGI----FSPLFLIYMILN 444
             +L  +  I+ +K +     ++  S    GS+++ +  I    F PL L+ + +N
Sbjct: 405 NGLLICLFVIYRWKSANFNASLEEGSSGYKGSWFEKYVDISLKTFIPLILLVIFVN 460