Pairwise Alignments

Query, 241 a.a., 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase from Methanococcus maripaludis S2

Subject, 245 a.a., N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'- phosphoribosyl)-4-imidazolecarboxamide isomerase (VIMSS) from Escherichia coli BW25113

 Score =  137 bits (345), Expect = 2e-37
 Identities = 76/239 (31%), Positives = 141/239 (58%), Gaps = 6/239 (2%)

Query: 2   LVIPAVDMKNKKCVQLIQGNPDKKHVELDNPPEIAKKWVNEGAEMLHLVDLDGALDGKRV 61
           ++IPA+D+ +   V+L QG+  K+    ++P    + +  +GAE+LHLVDL GA D  + 
Sbjct: 1   MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKR 60

Query: 62  NDEFIEEIIKKSGVPVQIGGGIRSIEDAEYLVEKGAKKVIIGTIAVENPEIIKELSKRIG 121
               I+ ++    VPVQ+GGG+RS ED   L+E G  +V++G+ AV++ +++K   +R G
Sbjct: 61  QIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVGSTAVKSQDMVKGWFERFG 120

Query: 122 SEKIMVSLDAK-----DGKVVIKGWKEKTKYTPVQIGKILEEMGAGSILFTNVDSEGLLN 176
           ++ ++++LD +     + +V + GW+E +  +  Q+ +    +G   +L T++  +G L 
Sbjct: 121 ADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETYLPVGLKHVLCTDISRDGTLA 180

Query: 177 GINIEPTKELVDNL-KIPIVASGGVTTIDDLLKLKEIGVYGVVVGSAIYKNMINLKDAI 234
           G N+   +E+     ++   +SGG+  IDD+  L+  GV GV+VG A+ +    +K+AI
Sbjct: 181 GSNVSLYEEVCARYPQVAFQSSGGIGDIDDVAALRGTGVRGVIVGRALLEGKFTVKEAI 239



 Score = 37.0 bits (84), Expect = 4e-07
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 5/116 (4%)

Query: 125 IMVSLDAKDGKVVIK---GWKEKTKYTPVQIGKILEEMGAGSILFTNVDSEGLLNGIN-- 179
           I+ +LD  DG VV      + ++  Y    + ++ +    G+ +   VD  G  +     
Sbjct: 2   IIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAEVLHLVDLTGAKDPAKRQ 61

Query: 180 IEPTKELVDNLKIPIVASGGVTTIDDLLKLKEIGVYGVVVGSAIYKNMINLKDAIE 235
           I   K LV  + +P+   GGV + +D+  L E GV  VVVGS   K+   +K   E
Sbjct: 62  IPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVGSTAVKSQDMVKGWFE 117