Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  127 bits (319), Expect = 1e-33
 Identities = 87/293 (29%), Positives = 150/293 (51%), Gaps = 15/293 (5%)

Query: 430 EITVLSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADM 489
           E+++LS E   +   L R ++T+E + D A Q  T A + S+ L+    E E+ A A + 
Sbjct: 229 EMSILSQEAR-LKTCLTRLQDTAEHLNDQAAQSNTLAHNSSSGLERQRVETEQVATAVNQ 287

Query: 490 -------VYNDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGEE 542
                  V +  +++ D+  E    +  G        + +Q+++  + E G ++ +L ++
Sbjct: 288 MAATTQEVASHVQRTADATQEANRLTGRGRDIAGETREAIQRLSVAVGETGVTVTQLAKD 347

Query: 543 SKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDI 602
           S +I  V  +IK +A+QT LLALNA+IEAARAG+ G+GFAVVA E++ LA+   +S   I
Sbjct: 348 SDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQI 407

Query: 603 NRTINGINKKVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNA 662
           +  I  + +     +    AG  + + GV  + E + A + I E+V     M  QI    
Sbjct: 408 HALIAKLQQTAAAAVQTMDAGHRQAEEGVARVMEADQALVGISEAVAHITDMTTQIAAAT 467

Query: 663 KNASNNTQEALRNVQDIASISEE-------FAATAEELTASSEEQNRAVEEID 708
           +  S+  +E  RN+  IA ++++        A  +EELT ++  Q   VE  +
Sbjct: 468 EEQSSVAEEISRNISTIALLADQTSEQAMNSAQLSEELTHTANTQYSLVERFN 520