Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  124 bits (311), Expect = 1e-32
 Identities = 83/287 (28%), Positives = 147/287 (51%), Gaps = 25/287 (8%)

Query: 438 LEDVGEGLKRAKETSEQVTDA-----------ANQVATAAADQSAKLQDTSDELEKTAKA 486
           L D G G+K     S  ++DA            +Q ATA A  +A +Q  +  ++ TA A
Sbjct: 246 LVDAGVGVKSRAAQSSDLSDAQAQMLDRQRSETDQSATAIAQMAATIQQVTHNVQSTAHA 305

Query: 487 ADMVYNDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESKKI 546
           A    +DA+Q        +  SE  +K +++    M  +++ ++++G+++  L E+++ I
Sbjct: 306 A----SDADQLA------QQGSELALKSLKD----MGSMSDAVNDIGQAVNALAEQTQSI 351

Query: 547 NEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTI 606
             V  +I  +AEQT LLALNA+IEAARAG+ G+GFAVVA E++SLA+  + S E+I+  I
Sbjct: 352 GSVVDVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTRASTEEIHHII 411

Query: 607 NGINKKVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNAS 666
             +    E  +     G       V +++ V +A   I  +V     M  Q+   ++  S
Sbjct: 412 ASLRAGAERAVSTASRGEQISRDSVHSVEAVQAALSGIAVAVSRITGMSQQMATASEQQS 471

Query: 667 NNTQEALRNVQDIASISEEFAATAEELTASSEEQNRAVEEIDASAEK 713
           +  ++  + +  IA + ++ A  A +    S++  R  E + + AE+
Sbjct: 472 HVAEDINQQIVRIAQLCDQSAGQARQGAEISQDLERMAEYLHSLAER 518



 Score = 25.0 bits (53), Expect = 0.010
 Identities = 17/110 (15%), Positives = 41/110 (37%)

Query: 617 IDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASNNTQEALRNV 676
           +D G+  +    +     D       + +   + SA  IAQ+    +  ++N Q      
Sbjct: 247 VDAGVGVKSRAAQSSDLSDAQAQMLDRQRSETDQSATAIAQMAATIQQVTHNVQSTAHAA 306

Query: 677 QDIASISEEFAATAEELTASSEEQNRAVEEIDASAEKMMEISRKLAEDAD 726
            D   ++++ +  A +        + AV +I  +   + E ++ +    D
Sbjct: 307 SDADQLAQQGSELALKSLKDMGSMSDAVNDIGQAVNALAEQTQSIGSVVD 356