Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 467 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

 Score =  457 bits (1177), Expect = e-133
 Identities = 260/475 (54%), Positives = 345/475 (72%), Gaps = 19/475 (4%)

Query: 262 YVPLKDSNGATIGMVFVGTPEAQFTQLVNNARNNTIIIALFGLLIAVVISLVSSRSITKP 321
           YVP+  +   +  ++FV      +  +  ++ N  I+  +F  ++++VIS      I K 
Sbjct: 7   YVPILITAILSSAIIFVSF----YALMAASSFNLNILFVVF--IVSIVISTAIGYVILKK 60

Query: 322 --INQLEDGVH---KFGSGDYDHTINVKTGDELEELANSFNKMAKDIKELHSMLDADKLS 376
             +N++++ +H   K    +Y+H       +  + + + F K+ KD   L +     K  
Sbjct: 61  TCLNKVDNFLHSSSKITGKEYEHCDE----EMFKTVISDFEKLKKDENSLKTY----KKD 112

Query: 377 LAKTLKEIFDIMDHLAEGDFSVRADENRHKNKLQKTINHAIENVSKMMENLKSEITVLSD 436
           ++ T  E+  I   L +GDF++RA+ +R  N LQ T N+AI NVS M+ +LK +I  L+ 
Sbjct: 113 VSNTFSELHTIFKSLEQGDFTIRANTDRKYNALQVTTNNAIVNVSTMVNDLKKQIEYLNA 172

Query: 437 ELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYNDAEQ 496
           EL    E L RA+ETSEQV DAA+QVATAAADQSAKLQD SD+LE T++    V + A+ 
Sbjct: 173 ELLKAKEDLVRAEETSEQVADAASQVATAAADQSAKLQDVSDQLEATSEITSAVTDAADD 232

Query: 497 SVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESKKINEVTVLIKDV 556
           +V +AIE+++NSE GVKKVENAI+TMQ ITNVI+ LGK+IQELG ESKKINEVTVLIKDV
Sbjct: 233 TVTAAIEIEENSEMGVKKVENAIETMQSITNVIENLGKAIQELGNESKKINEVTVLIKDV 292

Query: 557 AEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGINKKVETT 616
           AEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTING+N+KVE T
Sbjct: 293 AEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGVNRKVEAT 352

Query: 617 IDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASNNTQEALRNV 676
           IDLG++G+DEVD+GV+AIDEVN AF+KIKESVET+++ I  IK NA+ A NN + AL++ 
Sbjct: 353 IDLGISGKDEVDKGVIAIDEVNGAFLKIKESVETTSEKINSIKVNAERAVNNVETALKDS 412

Query: 677 QDIASISEEFAATAEELTASSEEQNRAVEEIDASAEKMMEISRKLAEDADEFKTK 731
           QDIASISEEFAATAEELTAS+EEQ+R + EID + E++ + S ++++D  +FKT+
Sbjct: 413 QDIASISEEFAATAEELTASAEEQSRIMNEIDDAIEEITKSSEQISKDVSKFKTE 467