Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 547 a.a., methyl-accepting chemotaxis protein from Magnetospirillum magneticum AMB-1

 Score =  141 bits (355), Expect = 1e-37
 Identities = 112/430 (26%), Positives = 193/430 (44%), Gaps = 59/430 (13%)

Query: 289 VNNARNNTIIIALFGLLIAVVISLVSSRSITKPINQLEDGVHKFGSGDYDHTINVKTG-- 346
           +N   + +I++    ++I +V++   SRSIT P+N +   +     GD    I   TG  
Sbjct: 170 INRGIDLSILVGAISVVIGMVLAFFISRSITNPVNAMTRAMGVLAGGDTSVEIPA-TGQK 228

Query: 347 DELEELANSFNKMAKDIKELHSMLDADKLSLAKTLKEIFDIMDHLAEGDFSVRADENRHK 406
           DE+ E+A++      +   + +M    +                    D   RA+  R +
Sbjct: 229 DEIGEMAHAVQVFKDNAIRVKAMQKEQE--------------------DAKARAEAERKQ 268

Query: 407 NKLQKTINHAIENVSKMMENLKSEITVLSDELEDVGEGLKRAKETSEQVTDAANQVATAA 466
             L             M ++ +S +  L   ++ V       + TS+ ++  A Q +  A
Sbjct: 269 AMLN------------MADSFESAVMGL---VKGVSAQASEMQATSQSMSAGAQQTSAQA 313

Query: 467 ADQSAKLQDTSDELEKTAKAADMVYNDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKIT 526
           A  +A  Q+ +  ++  A AA+ + +   +      E    S T  ++           T
Sbjct: 314 ATVAAAAQEATANVQTVAAAAEELSSSISEISRQVAEAAQVSATASEETAR--------T 365

Query: 527 NVIDELGKSIQELGEESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVAS 586
           N +      +Q L   + KI EV  LI D+A QT LLALNA+IEAARAGDAGKGFAVVA+
Sbjct: 366 NAM------VQGLAHAADKIGEVVSLINDIAAQTNLLALNATIEAARAGDAGKGFAVVAN 419

Query: 587 EIKSLAEEIKKSVEDINRTINGINKKVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKE 646
           E+K+LA +  ++ E+I+  +  + ++    +       D +      I++V      I  
Sbjct: 420 EVKNLANQTARATEEISSQVGSVQEETRRAV-------DAIRNIATVIEQVQQISSGIAS 472

Query: 647 SVETSAKMIAQIKDNAKNASNNTQEALRNVQDIASISEEFAATAEELTASSEEQNRAVEE 706
           +VE      A+I  N + A+  TQ+   NVQ I   + E  A ++++ A+S E  R  E 
Sbjct: 473 AVEEQGAATAEIARNVQEAAKGTQDVSANVQGITQTASETGAASQQVLAASGELARNSET 532

Query: 707 IDASAEKMME 716
           + A  +K ++
Sbjct: 533 LRAEVDKFLD 542



 Score = 29.3 bits (64), Expect = 5e-04
 Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 3/94 (3%)

Query: 637 VNSAFMKIKESVETSAKMIA---QIKDNAKNASNNTQEALRNVQDIASISEEFAATAEEL 693
           V     +  E   TS  M A   Q    A   +   QEA  NVQ +A+ +EE +++  E+
Sbjct: 285 VKGVSAQASEMQATSQSMSAGAQQTSAQAATVAAAAQEATANVQTVAAAAEELSSSISEI 344

Query: 694 TASSEEQNRAVEEIDASAEKMMEISRKLAEDADE 727
           +    E  +          +   + + LA  AD+
Sbjct: 345 SRQVAEAAQVSATASEETARTNAMVQGLAHAADK 378