Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 986 a.a., PAS domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  127 bits (318), Expect = 4e-33
 Identities = 92/322 (28%), Positives = 164/322 (50%), Gaps = 26/322 (8%)

Query: 389 DHLAEGDFS--VRADENRH-----------KNKLQKTINHAIENVSKMMENLKSEITVLS 435
           D +A GDF+  ++A+E R            + KL   +    EN  K  E L+SE+  L+
Sbjct: 386 DAIARGDFTHEIQAEEVREFQRSSALLRAMEAKLAYAVQERAENARKAQEKLRSEMLNLT 445

Query: 436 DELEDVGEGLKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYNDAE 495
           + LE  GE       T  +++  A ++   AA   A  ++  D+ E  A+A ++   + +
Sbjct: 446 ELLE--GE----VDNTVAEISTQAERLKEGAAHLLATAEELRDKSETVARAIEITSGNVQ 499

Query: 496 QSVDSAIEVKDNSETGVKKVENAIDTMQKITNVIDELGKSIQELGEESKKINEVTVLIKD 555
               +  E++ +S     +++++ +  +   + +DE   S+  L E + +I +V  LI+ 
Sbjct: 500 TVAGATEELEASSREITARIQSSSEHSEAARHRVDEASSSVGTLTEATARIGDVVSLIQA 559

Query: 556 VAEQTGLLALNASIEAARAGDAGKGFAVVASEIKSLAEEIKKSVEDINRTINGINKKVET 615
           +A QT +LALNA+IEAARAGDAGKGFAVVASE+K LAE+     ED    +N   + +E+
Sbjct: 560 IAGQTRMLALNATIEAARAGDAGKGFAVVASEVKGLAEQ----TEDAIGRVNAQARDIES 615

Query: 616 TIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIAQIKDNAKNASNNTQEALRN 675
           T    +A  + V   +  ++++     +I  S +       +I  +A  A+++T++    
Sbjct: 616 TTQKAVATVEAVADTIRDMEQIAG---QIAASADEQRAATGEIMSSAVQAADHTRDVADA 672

Query: 676 VQDIASISEEFAATAEELTASS 697
             D+   SE+   TA +++  S
Sbjct: 673 AADVLKASEQTGVTARKVSELS 694



 Score = 40.0 bits (92), Expect = 6e-07
 Identities = 30/149 (20%), Positives = 65/149 (43%), Gaps = 17/149 (11%)

Query: 582 AVVASEIKSLAEEIKKSVEDINRTINGINKKVETTIDLGLAGRDEVDRGVVAIDEVNSAF 641
           A +A  ++  AE  +K+ E +   +  + + +E  +D  +A             E+++  
Sbjct: 417 AKLAYAVQERAENARKAQEKLRSEMLNLTELLEGEVDNTVA-------------EISTQA 463

Query: 642 MKIKESVETSAKMIAQIKDNAKNASNNTQEALRNVQDIASISEEFAATAEELTA----SS 697
            ++KE          +++D ++  +   +    NVQ +A  +EE  A++ E+TA    SS
Sbjct: 464 ERLKEGAAHLLATAEELRDKSETVARAIEITSGNVQTVAGATEELEASSREITARIQSSS 523

Query: 698 EEQNRAVEEIDASAEKMMEISRKLAEDAD 726
           E    A   +D ++  +  ++   A   D
Sbjct: 524 EHSEAARHRVDEASSSVGTLTEATARIGD 552