Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 639 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  147 bits (370), Expect = 2e-39
 Identities = 132/557 (23%), Positives = 250/557 (44%), Gaps = 62/557 (11%)

Query: 191 NDHTLVDSIKASTGDESTLFLEN----YRISTSVVSGNSRAVGTT-ASDVVYNTVVKENT 245
           N   LVD++ +  G  +TLF +      R+ST+V+    RA+GT  A D      + +  
Sbjct: 106 NTFDLVDNLTSVMGGTATLFSKTGDDYIRVSTNVIKNGERAIGTKLAPDGKAIKKINQQE 165

Query: 246 EFMGSANVVGQSFLTKYVPLKDSNGATIGMVFVGTPEAQFTQLVNNARNNTIIIALFGLL 305
            + G+ +++G  +LT Y P+ +S+G  +G+ +VG   A    L    + + ++   F  L
Sbjct: 166 AYYGAVDILGSPYLTGYEPMFNSSGDVVGIWYVGY-SADLNVLEQAIKQSHVLKEGFVAL 224

Query: 306 ------IAVVISLVSSRSITKPINQLEDGVHK---FGSGDYDHTINVKTGDELEELANS- 355
                 I +  + V+ R +   +   +D V +   F    YD  +   T ++   + +S 
Sbjct: 225 RDAKGNIRMHSAHVNDRQVANALQPNDDWVVEVVPFSPWGYDIILVASTSEKSAMVRSSV 284

Query: 356 ----FNKMAKDIKELHSMLDADKLSLAKTLKEIFDIMDHLA--EGDFSVRADENRHKNKL 409
                  +   +  L ++    K  + K L+E   ++++L+  EGD + R   +R     
Sbjct: 285 LVVVLKIVLASVGILITIWLLVKYIVGKPLEEFIGVVNNLSSGEGDLTFRFQASRS---- 340

Query: 410 QKTINHAIENVSKMMENLKSEITVLSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQ 469
                   +    M       ++ L D L+ V E        SE++   A Q     +  
Sbjct: 341 --------DEFGTMARAFNGLLSQLQDTLQSVDEATDHMLAKSERLNATALQSKDTVSQL 392

Query: 470 SAKLQDTSDELEKTAKAADMVYNDAEQSVDSAIEVKDNSETGVKKVENAIDTMQKITNVI 529
           S + +  ++ +    + A  V +    S ++A     ++   V  +   I  +Q   + +
Sbjct: 393 SRETESINNAISLMQQNAQTVSSTIRSSSEAAHAADQDTRNSVSVLAQTIKDIQSQASDV 452

Query: 530 DELGKSIQELGEESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAVVASEIK 589
           D   + I EL + S++I+ V  +I+++AEQT LLALNA+IEAARAG+ G+GFAVVA E++
Sbjct: 453 DASVQVITELAQASEEISGVMEVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 512

Query: 590 SLAEEIKKSVEDINRTINGINKKVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVE 649
           SLA   + S E+I   I                  + + +G     E      K++++ E
Sbjct: 513 SLASRTQSSTEEIRNMI------------------ERLQQGSRVASE------KMQQNKE 548

Query: 650 TSAKMIAQIKDNAKNASNNTQEALRNVQDIASISEEFAATAEELTASSEEQNRAVEEIDA 709
           T+ K +    D  K+A ++ ++AL  V  I +++ + A  AE  T  + + N+ V  I  
Sbjct: 549 TAYKTV----DTTKHAGDSLKQALDAVARITTLNRDAATMAEGQTEVANDVNKGVSSIQQ 604

Query: 710 SAEKMMEISRKLAEDAD 726
                   ++++ ++ +
Sbjct: 605 VGNANTTYAKEVVDNCE 621



 Score = 28.1 bits (61), Expect = 0.001
 Identities = 35/151 (23%), Positives = 62/151 (41%), Gaps = 15/151 (9%)

Query: 402 ENRHKNKLQKTINHAIENVSKMMENLKSEITVLSDELEDVGEGLKRAKETSEQVTDAANQ 461
           + + KN   + +N      S M+E +KS + +L    E +GE  +    T +     A Q
Sbjct: 39  QEQKKNTADRLVNILTVTDSIMLERVKSSMALLKQRGEAIGEPNQTDIVTVKNT--QARQ 96

Query: 462 VATAAADQSAKLQDTSDELEKTAKAADMVYNDAEQSVDSAIEVKDNSETGVKKVENAIDT 521
           +    A+Q A   D  D L         +++   ++ D  I V  N    +K  E AI T
Sbjct: 97  LRLGNAEQ-ANTFDLVDNLTSVMGGTATLFS---KTGDDYIRVSTNV---IKNGERAIGT 149

Query: 522 MQKITNVIDELGKSIQELGEESKKINEVTVL 552
                  +   GK+I+++ ++      V +L
Sbjct: 150 K------LAPDGKAIKKINQQEAYYGAVDIL 174