Pairwise Alignments

Query, 731 a.a., methyl-accepting chemotaxis protein from Methanococcus maripaludis S2

Subject, 615 a.a., methyl-accepting chemotaxis protein from Agrobacterium fabrum C58

 Score =  153 bits (387), Expect = 2e-41
 Identities = 132/544 (24%), Positives = 247/544 (45%), Gaps = 68/544 (12%)

Query: 192 DHTLVDSIKASTGDESTLFL----ENYRISTSVVSGNS-RAVGTT-ASDVVYNTVVKENT 245
           D+ LVD   A  G  +T+F     E  R++T++ +    RA GT  A+D      V +  
Sbjct: 88  DNDLVDRTAAGNGGIATVFEAKAGEFIRLTTNLKNEKGERAAGTKLATDHPAFEKVSKGE 147

Query: 246 EFMGSANVVGQSFLTKYVPLKDSNGATIGMVFVGTPEAQFTQLVNNARNNTIIIALFGLL 305
            + G+A + G S++T Y+P+ +  GAT+G++FVG P   +   + + R+  ++     +L
Sbjct: 148 AYFGTATLFGTSYMTGYMPVTNKTGATVGILFVGVPMDFYNAQIYSLRDMMVVCGALAML 207

Query: 306 IAVVISLVSSRSITKPINQLEDGVHKFGSGDYDHTINVKTG-DELEELA--------NSF 356
              +++    +   +P+++L D V     GD +  I   T  +E   +A        N+ 
Sbjct: 208 GVGLLAYFVIKRTLQPLSKLTDAVKSLSDGDLETPIPYATNTNEFGNIARALVIFRENAI 267

Query: 357 NKMAKDIKELHSMLDADKLSLAKTLKEIFDIMDHLAEGDFSVRADE------NRHKNKLQ 410
            K+A + K       A + S A++ +   D      +G       E         +  L 
Sbjct: 268 EKLAIEGKS------AQERSAAESERHRNDAEKQELDGQIEFAVGEIASGLGRLSRGDLS 321

Query: 411 KTINHAIENVSKMMENLKSEITVLSDELEDVGEGLKRAKETSEQVTDAANQVATAAADQS 470
           +TI          ++ L+++    ++ L ++ + L + +E +  + ++  ++  ++ D S
Sbjct: 322 RTIETPFAG---RLDRLRTDF---NESLLNLRDALGQIRERTLIIQNSGIEIEQSSVDLS 375

Query: 471 AKLQDTSDELEKTAKAADMVYNDAEQSVDSAIEV-------KDNSETGVKKVENAIDTMQ 523
            + ++ +  LE+TA A + +      S + A E        K ++++    V NA+D M 
Sbjct: 376 KRTENQAASLEETAAAVEEITATVRSSAERAREANEAVRVTKQSADSSGSVVSNAVDAMS 435

Query: 524 KITNVIDELGKSIQELGEESKKINEVTVLIKDVAEQTGLLALNASIEAARAGDAGKGFAV 583
           +I                 S+KI ++  +I D+A QT LLALNA IEAARAG+AGKGFAV
Sbjct: 436 RIEGA--------------SRKIEQIIEVIDDIAFQTNLLALNAGIEAARAGEAGKGFAV 481

Query: 584 VASEIKSLAEEIKKSVEDINRTINGINKKVETTIDLGLAGRDEVDRGVVAIDEVNSAFMK 643
           VA E++ LA+    +  +I + IN                  EV  G   + E  +    
Sbjct: 482 VAQEVRELAQRSADAAREIKQLIN--------------QSTHEVSSGSKLVQEAGTVLSA 527

Query: 644 IKESVETSAKMIAQIKDNAKNASNNTQEALRNVQDIASISEEFAATAEELTASSEEQNRA 703
           I   + T ++ +  I    ++ S+       +V  +  ++++ AA AE+ +A+S   +  
Sbjct: 528 ISRQIVTVSQHVETIATATQDQSSALHNVNGSVNQMDQMTQQNAALAEQSSAASRVLSGE 587

Query: 704 VEEI 707
           VE +
Sbjct: 588 VEAL 591



 Score = 33.1 bits (74), Expect = 4e-05
 Identities = 64/317 (20%), Positives = 126/317 (39%), Gaps = 64/317 (20%)

Query: 445 LKRAKETSEQVTDAANQVATAAADQSAKLQDTSDELEKTAKAADMVYNDAEQSVDSAIEV 504
           +KR  +   ++TDA   ++    +        ++E    A+A  +   +A + +  AIE 
Sbjct: 217 IKRTLQPLSKLTDAVKSLSDGDLETPIPYATNTNEFGNIARALVIFRENAIEKL--AIEG 274

Query: 505 KDNSETGVKKVENAIDTMQK------ITNVIDELGKSIQEL--GEESKKI---------- 546
           K   E    + E   +  +K      I   + E+   +  L  G+ S+ I          
Sbjct: 275 KSAQERSAAESERHRNDAEKQELDGQIEFAVGEIASGLGRLSRGDLSRTIETPFAGRLDR 334

Query: 547 -----NEVTVLIKD----VAEQTGLLALNASIEAARAG-DAGKGFAVVASEIKSLAEEIK 596
                NE  + ++D    + E+T L+  N+ IE  ++  D  K     A+ +    EE  
Sbjct: 335 LRTDFNESLLNLRDALGQIRERT-LIIQNSGIEIEQSSVDLSKRTENQAASL----EETA 389

Query: 597 KSVEDINRTINGINKKVETTIDLGLAGRDEVDRGVVAIDEVNSAFMKIKESVETSAKMIA 656
            +VE+I  T+    ++                       E N A    K+S ++S  +++
Sbjct: 390 AAVEEITATVRSSAERAR---------------------EANEAVRVTKQSADSSGSVVS 428

Query: 657 QIKDNAKNASNNTQEALRNVQDIASISEEFAATAEELTASSE-EQNRAVEE---IDASAE 712
               NA +A +  + A R ++ I  + ++ A     L  ++  E  RA E        A+
Sbjct: 429 ----NAVDAMSRIEGASRKIEQIIEVIDDIAFQTNLLALNAGIEAARAGEAGKGFAVVAQ 484

Query: 713 KMMEISRKLAEDADEFK 729
           ++ E++++ A+ A E K
Sbjct: 485 EVRELAQRSADAAREIK 501