Pairwise Alignments

Query, 425 a.a., tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase from Methanococcus maripaludis S2

Subject, 448 a.a., tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) from Variovorax sp. SCN45

 Score =  150 bits (379), Expect = 8e-41
 Identities = 118/446 (26%), Positives = 216/446 (48%), Gaps = 33/446 (7%)

Query: 2   KIYIEGYGCTLNTADTQIIKNSVNEFEDFELTDNVDDSDIIVINTCIVRQETEHRMIS-- 59
           K++I+ +GC +N  D+  + + +N  + +E T NVD++D+I+ NTC VR++ + ++ S  
Sbjct: 3   KVFIKTFGCQMNEYDSDKMADVLNAAQGYEPTQNVDEADLILFNTCSVREKAQEKVFSDL 62

Query: 60  -RIEYFKSLDKKVVVAGCMAKALSKKIENLA---DVLIMPREAQHSGNILKDKLLKDFSE 115
            R+++ K+   K+ V GC+A    + I   A   D++  P+       +L D+      E
Sbjct: 63  GRVKHLKAKGVKIGVGGCVASQEGQAIIARAPYVDIVFGPQTLHRLPEMLNDR------E 116

Query: 116 KNNESTQNLNF-EDKLNEKIKKVSSQGLITALPICEGCLGSCTYCIVKRARGNLASYDRD 174
           + +    +++F E +  + +     +G    + I EGC   C+YC+V   RG   +   D
Sbjct: 117 RLDRPQVDISFPEIEKFDHLPPARVEGATAFVSIMEGCSKYCSYCVVPYTRGEEVNRPLD 176

Query: 175 LIVKKAEELVKSGTKCLLVTAQDTACYGLDNNDS-----LPNLINDISEIPEKFAMRIGM 229
            ++ +   L   G + + +  Q+   Y     D+        LI  ++EIP    +R   
Sbjct: 177 DVLVEIAGLADQGVREITLLGQNVNAYRGKMGDTAEIADFALLIEYVAEIPGIERIRYTT 236

Query: 230 MHAKFAEPILDELIESF-KSEKVVKFLHLPIQSGDDQVLKDMNRNYTVDEYISVLNEFKS 288
            H     P    LIE++ K  ++V  LHLP+Q G D++L  M R YT  EY S + + ++
Sbjct: 237 SHPNEFTP---RLIEAYAKVPQLVSHLHLPVQHGSDRILMAMKRGYTAMEYKSTVRKLRA 293

Query: 289 KIKNLNFTTDVIVGFPTETEEAFENTLEIVKKIKPDFTHAAKYSQRKYTKAAILKQVDT- 347
               L  ++D IVGFP ET++ F   ++++   + D + +  +S R  T AA L   DT 
Sbjct: 294 IRPELALSSDFIVGFPGETDDDFNKMMKLIDDCQFDASFSFIFSPRPGTPAAALHD-DTP 352

Query: 348 -KIRKERSEILNELRRELSYENNKRHIGETFEILV-------TKDNMGVTDNCKNVIFEE 399
            +++  R   L  +         +  +G T  +LV         + MG T   + V FE 
Sbjct: 353 HEVKLARLHTLQAVIDANVKRFGQALVGTTQRVLVEGASRKDANELMGRTACNRVVNFEG 412

Query: 400 PAK-IGEFKRVKITGAKTFGLSGKLI 424
            A+ +G+   ++IT +  + L G+++
Sbjct: 413 DARLVGQMTDLRITRSLAYTLRGEVV 438