Pairwise Alignments

Query, 425 a.a., tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase from Methanococcus maripaludis S2

Subject, 438 a.a., tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase from Magnetospirillum magneticum AMB-1

 Score =  136 bits (342), Expect = 1e-36
 Identities = 95/396 (23%), Positives = 194/396 (48%), Gaps = 23/396 (5%)

Query: 2   KIYIEGYGCTLNTADTQIIKNSVNEFEDFELTDNVDDSDIIVINTCIVRQETEHRMISRI 61
           +++++ YGC +N  D+  + + +     +   D+ +++D++++NTC +R++   ++ S +
Sbjct: 4   RLFVKTYGCQMNVYDSARMADVLAPL-GYGPADHAEEADMVILNTCHIREKAAEKVFSEL 62

Query: 62  EYFKSLDKK---------VVVAGCMAKALSKKIENLA---DVLIMPREAQHSGNILKDKL 109
              + L            + VAGC+A+A  ++I   A   D+++ P+       ++    
Sbjct: 63  GRLRKLQAAKAEAGGRMILAVAGCVAQAEGEEILRRAPFVDIVLGPQTYHRLPEMVAQAA 122

Query: 110 LKDFSEKNNESTQNLNFEDKLNEKIKKVSSQGLITALPICEGCLGSCTYCIVKRARGNLA 169
               +  + E      F+      + +  ++G    L + EGC   CT+C+V   RG   
Sbjct: 123 RAGGAVLDTEFPAEPKFDF-----LPEPHAEGTSAFLSVQEGCDKFCTFCVVPYTRGAEY 177

Query: 170 SYDRDLIVKKAEELVKSGTKCLLVTAQDTACYGLDNNDSLPNLINDISEIPEKFAMRIGM 229
           S     ++ +A  L   G + + +  Q+   +       L  LI  ++E+     +R   
Sbjct: 178 SRPAAAVLAEAATLAAGGVREITLLGQNVNGWHGGEGWGLGRLIRALAEVEGVERIRYTT 237

Query: 230 MHAKFAEPILDELIESFKS-EKVVKFLHLPIQSGDDQVLKDMNRNYTVDEYISVLNEFKS 288
            H +  +   DELI +     +++ FLHLP+QSG D++L  MNR +  D Y+ ++++ KS
Sbjct: 238 SHPRDMD---DELIRAHAELPQLMPFLHLPVQSGSDRILAAMNRGHDRDTYLRLVDKLKS 294

Query: 289 KIKNLNFTTDVIVGFPTETEEAFENTLEIVKKIKPDFTHAAKYSQRKYTKAAILK-QVDT 347
              +L  ++D IVGFP E++  FE ++++++++    T++ KYS R  T AA ++ QV  
Sbjct: 295 ACPDLALSSDFIVGFPGESDADFEASMDLIRRVGFVQTYSFKYSPRPGTPAAAMETQVPE 354

Query: 348 KIRKERSEILNELRRELSYENNKRHIGETFEILVTK 383
            ++ ER   +  L  + +   N   +G    IL+ +
Sbjct: 355 AVKDERLAQVQALLLDQTMRFNHACVGREMRILLDR 390