Pairwise Alignments

Query, 285 a.a., zinc metalloprotease HtpX from Methanococcus maripaludis S2

Subject, 252 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score = 48.5 bits (114), Expect = 1e-10
 Identities = 49/220 (22%), Positives = 82/220 (37%), Gaps = 47/220 (21%)

Query: 65  APNLHRIVESIANRANIQKPKVAIINTDTPNAFATGRSPKNGVVAVTTGILQLLNEQELE 124
           A  L  I  ++ N  N Q     +      NAFA      NG + V +G++ ++ + E+E
Sbjct: 70  AKRLTTIANALGNNINGQPVNYKVYMAKDVNAFAMA----NGCIRVYSGLMDMMTDNEVE 125

Query: 125 GVLAHEIGHIKHRDILIGTIVATMAGAIMYIANFLQWGMLFGYGRDDDGNPLQIVASLLF 184
            V+ HE+GH+    +  G  VA    A+   A                 +   IV SL  
Sbjct: 126 AVIGHEMGHVALGHVKKGMQVALGTNAVRVAA----------------ASAGGIVGSLSQ 169

Query: 185 IILAPIAAMVVQFAISRQNEYNADENG-----AKYSNPIYLANALTKLEKGVKYHPLRNG 239
             L  +   +V    S++ E  AD+        +  +P  LA +  KL K          
Sbjct: 170 SQLGNLGEKLVNSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLAK---------- 219

Query: 240 SPATAHMFIVNPFKAGNVARLFSTHPSTEERVKRLMEMAS 279
                        + G  + +F  HP++ ER + + +  S
Sbjct: 220 ------------LEEGRQSSMFDDHPASAERAQHIRDRMS 247