Pairwise Alignments

Query, 892 a.a., alanine--tRNA ligase from Methanococcus maripaludis S2

Subject, 872 a.a., alanyl-tRNA synthetase from Pseudomonas simiae WCS417

 Score =  255 bits (651), Expect = 9e-72
 Identities = 241/907 (26%), Positives = 405/907 (44%), Gaps = 158/907 (17%)

Query: 63  EMVKEFTNFFDEKGHTPVKRSPVVAKRWRDDILLTIASIAVFQPWVTSGLVKPVKNPLVI 122
           E+ + F  FF+E+GHT V  S ++       +L T A +  F+     G  K      V 
Sbjct: 5   EIREAFLRFFEEQGHTRVASSSLIPGN-DPTLLFTNAGMNQFKDCFL-GQEKRAYTRAVS 62

Query: 123 AQPCIRL----NDIDNVGRTGRHLTCFTMGAHHAFN------------------------ 154
           +Q C+R     ND++NVG T RH T F M  + +F                         
Sbjct: 63  SQKCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKQDAINFAWTFLTGVLKLPKE 122

Query: 155 -------SKDD--YKYWTDKTVEYCFELMQRLGIDGKTITFIESWWEGG--GNAGPCYEV 203
                  + DD  Y  WT K V    E M R+G +       +++W  G  G  GPC E+
Sbjct: 123 KLWVTVYASDDEAYDIWT-KEVGVPAERMVRIGDNKGAPYASDNFWTMGDTGPCGPCTEI 181

Query: 204 I-THG------------------VELATLVFMQYKKIGNDY-EEIPLKIVDTGYGIERFA 243
              HG                  +E+   VFMQ+ +  +     +P   VDTG G+ER +
Sbjct: 182 FYDHGADIWGGPPGSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERIS 241

Query: 244 WASQGTPTVYESLFSEIIEKLKEDAGIPEVDEKIMAESATLAGLMDIENVGDLRVLRQKV 303
              Q   + YE                 ++ + ++A +A   G  + E+   L+V     
Sbjct: 242 AVMQHVHSNYEI----------------DLFQSLLAAAAKAIGCTN-EDQASLKV----- 279

Query: 304 AEKIGMDVDELDKLISPLEYIYAIADHTRCLSFMFGDGIVPSNVKEGYLARLVLRKTLRY 363
                                  +ADH R   F+  DG++PSN   GY+ R ++R+  R+
Sbjct: 280 -----------------------VADHIRSCGFLIADGVLPSNEGRGYVLRRIIRRACRH 316

Query: 364 MEKIGISMSI-KDIISMQLENMKEIYPELSAMKEYIMDVLDAEEKKYIQTVNRGRGIVER 422
             K+G + S    I++  +  M E +PEL   + +I  VL AEE+++ +T+ +G  I+E+
Sbjct: 317 GNKLGANGSFFYQIVAALVAEMGEAFPELKQNQAHIERVLKAEEEQFAKTLEQGLKILEQ 376

Query: 423 MAASK--SEITLDDLIELYDSNGLPPEIVKDVVDDLNKKGKKTIAITVPDNFYT--IVAE 478
             A+   S +  D + +LYD+ G P ++  D+  + N        +T+ +  +   + A+
Sbjct: 377 DLANLQGSVVPGDVVFKLYDTYGFPMDLTGDIARERN--------LTLDEEGFEREMEAQ 428

Query: 479 RHEEEKPEEVVSTKKELPELEVSKTELLFFKHPTQVEFEAKVLKIVEK------------ 526
           R               L +++V+ TE   +K        AKV+ + ++            
Sbjct: 429 RVRARSASSFGMDYNSLVKVDVA-TEFTGYK---ATRGAAKVVALYKEGQSVDVLNEGDD 484

Query: 527 -YVVLDKTLFYAEGGGQKYDIGQLND----IEVMDVQKKNG-IVFHKVSDISKFKEGDTV 580
             VVLD+T FYAE GGQ  D G L       +V D  K  G  + H V        G  V
Sbjct: 485 GVVVLDQTPFYAESGGQIGDCGFLEASSGRFDVRDTTKTGGAFLHHGVLASGSLTVGSPV 544

Query: 581 KGAVNWDNRLKLMRNHTATHVINAAATRVLGKHVWQTGSNVDTEKGRLDITHYERISREQ 640
           +  V+ D R     NH+ATH+++AA  +VLG+HV Q GS VD+++ R D +H+E I  EQ
Sbjct: 545 EAQVDADVRHATSLNHSATHLLHAALRQVLGEHVQQKGSLVDSQRLRFDFSHFEAIKPEQ 604

Query: 641 VKEIERIANEIVLSKMPVNSTFMDRNDAEQKYGFTIYQGGVVPGDTLRIIEIEGT-DVEA 699
           +K +E I N  +     V +   D   A+ K    ++  G   GD++R++ + G   VE 
Sbjct: 605 IKALEDIVNAEIRKNTAVETEETDIETAKAKGAMALF--GEKYGDSVRVLSMGGDFSVEL 662

Query: 700 CGGTHCSNTSECGYIKVLKTERIQDGVERLEYSTGMGSVSEIASLEDTLIDSAEILGIPN 759
           CGG H + T +   +K++    +  GV R+E  TG  +++ + + E+ L ++A ++    
Sbjct: 663 CGGIHANRTGDIALLKIVSEGGVASGVRRIEAVTGAAALAYLNAAEEQLKEAASLVKGSR 722

Query: 760 DQLPKTVKRFFEEWKEQKKTIEELQKKVGELVKYELADKFENVGNYEVLVEQVSGTPNE- 818
           D L   +    E  +  +K +E+LQ K       +L+    +V + +VL  ++ G   + 
Sbjct: 723 DNLIDKLSAVLERNRALEKQLEQLQAKAASAAGDDLSASAVDVKDVKVLAARLDGQDGKA 782

Query: 819 LMSIADNL--AVGNKLIVL--MNENDYLL---CKRGENVELSMKDLIRNI-----GKGGG 866
           L+++ D L   +G  +I+L  ++E+  +L     +    +L   DL++       GKGGG
Sbjct: 783 LLALVDQLKNKLGRAVILLGGVHEDKVVLVAGVTKDLTGQLKAGDLMKQAAAAVGGKGGG 842

Query: 867 KDNLAQG 873
           + ++AQG
Sbjct: 843 RPDMAQG 849