Pairwise Alignments

Query, 892 a.a., alanine--tRNA ligase from Methanococcus maripaludis S2

Subject, 874 a.a., Alanyl-tRNA synthetase (EC 6.1.1.7) from Variovorax sp. SCN45

 Score =  243 bits (619), Expect = 5e-68
 Identities = 241/911 (26%), Positives = 394/911 (43%), Gaps = 165/911 (18%)

Query: 59  YTYNEMVKEFTNFFDEKGHTPVKRSPVVAKRWRDDILLTIASIAVFQPWVTSGLVKPVKN 118
           +T  ++ K F +FF  KGHT V  S +V       ++ T + +  F+        +P   
Sbjct: 6   FTVADIRKTFLDFFASKGHTVVPSSSLVPGN-DPTLMFTNSGMVQFKDVFLGEDKRPYVR 64

Query: 119 PLVIAQPCIRL----NDIDNVGRTGRHLTCFTMGAHHAFNSKDDYKYWTDKTVEYCFELM 174
              + Q C+R     ND++NVG T RH T F M  + +F       Y+  +++++ FEL+
Sbjct: 65  AASV-QACLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGD-----YFKRESLKWAFELL 118

Query: 175 ---------------------------QRLGIDGKTITFI----------ESWW--EGGG 195
                                      + +G+  + +  I          +++W     G
Sbjct: 119 TQVYKLPAEKLWATVYIEDDEAYDIWTKEIGLPPERVVRIGDNKGGRYMSDNFWMMADTG 178

Query: 196 NAGPCYEVI-THG------------------VELATLVFMQYK-KIGNDYEEIPLKIVDT 235
             GPC E+   HG                  +E+   VFMQ+  +     +++P   VDT
Sbjct: 179 PCGPCSEIFFDHGPEIPGGPPGSPDEDGDRYIEIWNNVFMQFDMQPDGSVKKLPAPCVDT 238

Query: 236 GYGIERFAWASQGTPTVYESLFSEIIEKLKEDAGIPEVDEKIMAESATLAGLMDIENVGD 295
           G G+ER A   Q   + YE    +I + L + AG                G  D+ N   
Sbjct: 239 GMGLERLAAILQHVHSNYEI---DIFDALIKAAGRE-------------TGTQDLSN-NS 281

Query: 296 LRVLRQKVAEKIGMDVDELDKLISPLEYIYAIADHTRCLSFMFGDGIVPSNVKEGYLARL 355
           L+V                            IADH R  SF+  DG++PSN   GY+ R 
Sbjct: 282 LKV----------------------------IADHIRATSFLVADGVIPSNEGRGYVQRR 313

Query: 356 VLRKTLRYMEKIG-----ISMSIKDIISMQLENMKEIYPELSAMKEYIMDVLDAEEKKYI 410
           ++R+ +R+  K+G         + D++ +    M + YP+L A ++ I D L AEE+++ 
Sbjct: 314 IIRRAIRHGYKLGQKKPFFHKLVPDLVKL----MGDAYPKLVADEKRITDTLKAEEERFF 369

Query: 411 QTVNRGRGIVERMAASKSEITLDDL-IELYDSNGLPPEIVKDV-------VDD--LNKKG 460
           +T+  G  I++      +     ++  +L+D+ G P ++  DV       VD+   N   
Sbjct: 370 ETLANGMEILDAALVGGARTLPGEVAFKLHDTYGFPLDLSADVCRERGVSVDEAGFNVAM 429

Query: 461 KKTIAITVPDNFYTIVAERHEEEKPEEVVSTKKELPELEVSKTELLFFKHPTQVEFEAKV 520
           +K  A       + +  +R+ E      V T  E   LE S   +  +   T V+   ++
Sbjct: 430 EKQKAAGRAGGKFKM--DRNVEYTGAGNVFTGYE--HLEESAKVVALYLEGTAVQ---EL 482

Query: 521 LKIVEKYVVLDKTLFYAEGGGQKYDIGQLN----DIEVMDVQKKNGIVF--HKVSDISKF 574
            +     VVLD T FYAE GGQ  D G L        V D QK    VF  H        
Sbjct: 483 KEGQSGIVVLDTTPFYAESGGQVGDQGVLVAEGVQFGVEDTQKIKADVFGHHGTQTQGTL 542

Query: 575 KEGDTVKGAVNWDNRLKLMRNHTATHVINAAATRVLGKHVWQTGSNVDTEKGRLDITHYE 634
           K GD VK AV+   R   MRNH+ TH+++ A   VLG HV Q GS VD +K R D  H  
Sbjct: 543 KVGDAVKAAVDTARRAATMRNHSVTHLMHKALREVLGDHVQQKGSLVDADKTRFDFAHNA 602

Query: 635 RISREQVKEIERIANEIVLSKMPVNSTFMDRNDAEQKYGFTIYQGGVVPGDTLRIIEIEG 694
            ++REQ+ EIE+  N  +L+  P  +  MD   A++     ++  G   G+T+R+++I G
Sbjct: 603 PVTREQIAEIEKRVNAEILANAPTQARVMDMESAQKTGAMMLF--GEKYGETVRVLDI-G 659

Query: 695 TDVEACGGTHCSNTSECGYIKVLKTERIQDGVERLEYSTGMGSVSEIASLEDTLIDSAEI 754
           +  E CGGTH S T + G  K++    +  GV R+E  TG  ++S +  LE T+   A  
Sbjct: 660 SSRELCGGTHVSRTGDIGLFKIVSEGGVAAGVRRIEAVTGANALSYLQDLESTVQSVAAT 719

Query: 755 LGIPNDQLPKTVKRFFEEWKEQKKTIEELQKKVGELVKYELADKFENVGNYEVLVEQVSG 814
           L  P  +L   + +  E+ K  ++ +  L+ K+      EL  +  +V   +VL  ++ G
Sbjct: 720 LKSPAAELQGRLTQVLEQVKALEREVGSLKGKLASSKGDELLAQAVDVNGIKVLAAKLDG 779

Query: 815 TPNELM-----SIADNLAVGNKLIVLMNENDYLLCKRGENVELSMK----DLIRNI---- 861
              + +      + D L     +++   + D +    G   + + K    +L+  +    
Sbjct: 780 ADAKTLRDTMDKLKDKLKTA-AIVLAAVDGDKVQIAAGVTADSTAKVKAGELVNFVAQQV 838

Query: 862 -GKGGGKDNLA 871
            GKGGGK ++A
Sbjct: 839 GGKGGGKADMA 849