Pairwise Alignments

Query, 892 a.a., alanine--tRNA ligase from Methanococcus maripaludis S2

Subject, 888 a.a., Alanyl-tRNA synthetase (EC 6.1.1.7) from Sphingobium sp. HT1-2

 Score =  211 bits (538), Expect = 1e-58
 Identities = 239/924 (25%), Positives = 390/924 (42%), Gaps = 176/924 (19%)

Query: 62  NEMVKEFTNFFDEKGHTPVKRSPVVAKRWRDDILLTI-ASIAVFQPWVTSGLVKPVKNPL 120
           N++ + F ++F   GHT V  +P+V     D  L+ + A +  F+   T    +P K   
Sbjct: 5   NDIRRSFLDYFGANGHTIVPSAPLVPHN--DPTLMFVNAGMVPFKNVFTGLETRPYKTA- 61

Query: 121 VIAQPCIRL----NDIDNVGRTGRHLTCFTMGAHHAFNS----KDDYKYWTDKTVEY--- 169
             +Q  +R     ND+DNVG T RH T F M  + +F      +  +  WT  T E+   
Sbjct: 62  TSSQKSVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQAIHHAWTLLTKEWGLP 121

Query: 170 --------------CFELMQRL-GIDGKTITFI---ESWWEGG--GNAGPCYEVI-THG- 207
                          F+L +++ G+    I  I   +++W  G  G  GPC E+   HG 
Sbjct: 122 AEKLTTTVYHTDDEAFDLWKKIAGLPDHKIIRIPTKDNFWVMGDSGPCGPCSEIFYDHGD 181

Query: 208 -----------------VELATLVFMQYKKIGNDY-EEIPLKIVDTGYGIERFAWASQGT 249
                            VE+  LVFMQY++  N+   E+P   +DTG G+ER A   QG 
Sbjct: 182 HIWGGPPGSPEEDGDRFVEIWNLVFMQYEQEANEIVSELPKPSIDTGMGLERIAAVMQGV 241

Query: 250 PTVYESLFSEIIEKLKEDAGIPEVDEKIMAESATLAGLM-DIENVGDLRVLRQKVAEKIG 308
              Y+      I+  K           ++AES  L     D E     RV          
Sbjct: 242 HNNYD------IDTFKA----------LIAESGALTRTATDGEFQASHRV---------- 275

Query: 309 MDVDELDKLISPLEYIYAIADHTRCLSFMFGDGIVPSNVKEGYLARLVLRKTLRYMEKIG 368
                             IADH R  SF+  DG++P+N   GY+ R ++R+ +R+   IG
Sbjct: 276 ------------------IADHLRSTSFLIADGVLPANEGRGYVLRRIMRRAMRHAHIIG 317

Query: 369 ISMSIK-DIISMQLENMKEIYPELSAMKEYIMDVLDAEEKKYIQTVNRGRGIVERMAASK 427
               +   ++S  +  M   YPEL   +  I + L  EE ++ +T+  G  +++   A  
Sbjct: 318 AKDPLMYRLVSSLVSEMGGAYPELVRAQPLIEETLLREETRFRKTLENGLKLLDEATADL 377

Query: 428 SE---ITLDDLIELYDSNGLPPEIVKDVVDDLNKKGKKTIAITVPD-NFYTIVAERHEEE 483
           +E   +  +   +LYD+ G P ++ +D +        +T  ++V    F   +AE+    
Sbjct: 378 AEGATLPGETAFKLYDTYGFPYDLTEDAL--------RTQGLSVDRAGFDAAMAEQKAAA 429

Query: 484 KPEEVVSTKKELPELEVSKTELLF---FKHPTQVEFEAKVLKIVEK-------------Y 527
           +     S +K   E+     E L    F   T  + E +VL I++               
Sbjct: 430 RAAWKGSGEKASDEIWYDIAETLGSTEFIGYTSTKGEGEVLAIIKDGARVDAASAGDKVT 489

Query: 528 VVLDKTLFYAEGGGQKYDIGQLNDI-----EVMDVQKKNGIVFHKVSDIS--KFKEGDTV 580
           ++ ++T FY E GGQ  D G +  +     EV D  K  G +    + IS    K GDTV
Sbjct: 490 IITNQTPFYGESGGQNGDAGTITTLGGLVAEVADTSKPLGRLHAHQAVISAGSVKVGDTV 549

Query: 581 KGAVNWDNRLKLMRNHTATHVINAAATRVLGKHVWQTGSNVDTEKGRLDITHYERISREQ 640
              V+ + R ++  NH+ATH+++AA  + LG HV Q GS V  ++ R D +H E +++ Q
Sbjct: 550 NLTVDVERRDRIRANHSATHLLHAALRKELGGHVTQKGSMVAADRLRFDFSHPEALTQAQ 609

Query: 641 VKEIERIANEIVLSKMPVNSTFMDRNDAEQKYGFTIYQGGVVPGDTLRIIE-----IEGT 695
           +  +E   N  +     V +  M  +DA       ++  G   GD +R++      + G 
Sbjct: 610 IARVEADVNAQIRHNDEVMTRLMTPDDAIAAGAMALF--GEKYGDEVRVLSMGAKGLGGD 667

Query: 696 D----VEACGGTHCSNTSECGYIKVLKTERIQDGVERLEYSTGMGSVSEIASLEDTLIDS 751
           D    VE CGGTH     +    K++    +  GV R+E  TG  +   +   ++ L  +
Sbjct: 668 DHSYSVELCGGTHVRALGDIALFKIVSESAVSSGVRRIEALTGEAARLWLVERDEKLRQT 727

Query: 752 AEILGIPNDQLPKTVKRFFEEWKEQKKTIEELQKKV----GELVKYELADKFENVGNYEV 807
           A  L    +++P  +    E+ ++ ++ + E +K +    G   K    +K   VG+ + 
Sbjct: 728 AAALKTTPEEVPARIAALVEQSRKLERELAEAKKALALGGGGSAKPAGPEK---VGSVDF 784

Query: 808 LVEQVSG-TPNELMSIADNLAVGNKLIVLMNENDYLLCKRGENV-----------ELSMK 855
           L + + G  P EL  I D    GNK  +    +  L    G                S  
Sbjct: 785 LGQVIDGLDPKELRGIVD----GNKKTLGSGVSAVLAVVDGRATIAVGVTDDLTGSFSAV 840

Query: 856 DLIRN-----IGK-GGGKDNLAQG 873
           DL+R       GK GGG+ ++AQG
Sbjct: 841 DLVRAGVAALGGKGGGGRADMAQG 864