Pairwise Alignments

Query, 892 a.a., alanine--tRNA ligase from Methanococcus maripaludis S2

Subject, 878 a.a., alanine--tRNA ligase from Magnetospirillum magneticum AMB-1

 Score =  228 bits (581), Expect = 1e-63
 Identities = 229/920 (24%), Positives = 388/920 (42%), Gaps = 173/920 (18%)

Query: 60  TYNEMVKEFTNFFDEKGHTPVKRSPVVAKRWRDDILLTIASIAVFQPWVTSGLVKPVKNP 119
           T NE+ + F +FF++ GHT V  SP+V +     ++ T A +  F+  V +G+ K     
Sbjct: 3   TANEIRRTFLDFFEKNGHTVVNSSPLVPRN-DPTLMFTNAGMVQFKN-VFTGIEKRDYVR 60

Query: 120 LVIAQPCIRL----NDIDNVGRTGRHLTCFTMGAHHAFNSKDDYKYWTDKTVEYCFELMQ 175
              +Q C+R     ND+DNVG T RH T F M  + +F       Y+ D  +E+ + L+ 
Sbjct: 61  AASSQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGD-----YFKDLAIEHAWNLIT 115

Query: 176 R-LGIDGKTITFI-----------------------------ESWWEGG--GNAGPCYEV 203
           +  GID   +                                +++W  G  G  GPC E+
Sbjct: 116 KDFGIDKSRLLVTVYHDDDQAADAWKKIAGLPESRIIRIPTSDNFWAMGDTGPCGPCSEI 175

Query: 204 I-THG------------------VELATLVFMQYKKIGNDYE-EIPLKIVDTGYGIERFA 243
              HG                  +E+  LVFMQ++++  +    +P   +DTG G+ER A
Sbjct: 176 FYDHGEHIFGGPPGSPDQDGDRFIEIWNLVFMQFEQVDKETRIPLPKPSIDTGMGLERLA 235

Query: 244 WASQGTPTVYESLFSEIIEKLKEDAGIPEVDEKIMAESATLAGLMDIENVGDLRVLRQKV 303
                                                 A L G  D  +V  LR L +  
Sbjct: 236 --------------------------------------ALLQGKHDNYDVDLLRALIEAS 257

Query: 304 AEKIGMDVDELDKLISPLEYIYAIADHTRCLSFMFGDGIVPSNVKEGYLARLVLRKTLRY 363
           AE    D D   K+   +     +ADH R  SF+  DG++PSN   GY+ R ++R+ +R+
Sbjct: 258 AEASNTDPDGPHKVSHRV-----VADHLRSSSFLIADGVLPSNEGRGYVLRRIMRRAMRH 312

Query: 364 MEKIGISMSI-KDIISMQLENMKEIYPELSAMKEYIMDVLDAEEKKYIQTVNRGRGIVE- 421
              +G +  +   ++      M E YPEL      I + L  EE ++  T+++G  +++ 
Sbjct: 313 AHLMGCTEPLLHKLVPALTRQMGEAYPELVRANALITETLKLEETRFKVTLDKGLKLLDD 372

Query: 422 --RMAASKSEITLDDLIELYDSNGLPPEIVKDVVDDLNKKGKKTIAITVPDNFYTIVAER 479
                 S  ++  +   +LYD+ G P ++ +D +        K   I V  + +    ER
Sbjct: 373 EITRIGSGQKLAGEVAFKLYDTYGFPLDLTQDAL--------KAKGIGVDTDGFASAMER 424

Query: 480 HEEEKPEEVVSTKKELPEL-------EVSKTELLFFKHPTQVEFEAKVLKIVEK------ 526
              E  +    +     E        ++  +E L +      + E K++ +VE       
Sbjct: 425 QRAEARKAWAGSGDTATETVWFELREKLGASEFLGYDAE---QAEGKIVALVENGKVVEA 481

Query: 527 -------YVVLDKTLFYAEGGGQKYDIGQLN----------DIEVMDVQKKNG--IVFHK 567
                   V+ ++T FY E GGQ  D G +            I V D QKK G  IV   
Sbjct: 482 VHPGHQVAVIANQTPFYGESGGQMGDTGVITLGTPGTGGKATIAVTDTQKKLGDLIVHFG 541

Query: 568 VSDISKFKEGDTVKGAVNWDNRLKLMRNHTATHVINAAATRVLGKHVWQTGSNVDTEKGR 627
             +      G+    AV    R     +H+ATH+++AA   +LG HV Q GS V  ++ R
Sbjct: 542 TVEGGPVAVGEDAHFAVESTRRDATRGHHSATHLLHAALRDILGDHVTQKGSQVGPDRLR 601

Query: 628 LDITHYERISREQVKEIERIANEIVLSKMPVNSTFMDRNDAEQKYGFTIYQGGVVPGDTL 687
            D  H + +S E+ + +E   N  +     V +  M  +DA +     ++  G   G+ +
Sbjct: 602 FDFAHTKALSAEETRAVEAEVNRRIRLNAEVATKVMTPDDAIKAGAMALF--GEKYGEEV 659

Query: 688 RIIEIEGTDVEACGGTHCSNTSECGYIKVLKTERIQDGVERLEYSTGMGSVSEIASLEDT 747
           R++ +     E CGGTH + T + G  K++    +  GV R+E  TG   ++   + ED 
Sbjct: 660 RVVSMGDLSTELCGGTHANRTGDIGGFKIVAESAVASGVRRIEAVTGPAFLAWAQAQEDL 719

Query: 748 LIDSAEILGIPNDQLPKTVKRFFEEWKEQKKTIEELQKKVGELVKYELADKFENVGNYEV 807
           L  +A+ L      LP  +    ++ ++ ++ + E++K++        A K  N   Y  
Sbjct: 720 LAKAADTLKAAPADLPARIAGLMDDRRKLERELAEVRKQLATGGGQGAATKTVNGITYAG 779

Query: 808 LVEQVSGTP-NELMSIADNL--AVGNKLIVLMNEND----YLLCKRGE-NVELSMKDLIR 859
            V  +SG P  +L  +AD +   +G+ +I L+++ D     ++C   +   + S  DL+R
Sbjct: 780 KV--LSGVPAKDLKGMADEIKKQIGSGIIALVSDADGKASIVVCVTEDLTSKHSAVDLVR 837

Query: 860 NIGK-------GGGKDNLAQ 872
            IG        GGG+ ++AQ
Sbjct: 838 -IGSEALGGKGGGGRPDMAQ 856