Pairwise Alignments

Query, 892 a.a., alanine--tRNA ligase from Methanococcus maripaludis S2

Subject, 875 a.a., alanine--tRNA ligase from Serratia liquefaciens MT49

 Score =  246 bits (629), Expect = 3e-69
 Identities = 240/909 (26%), Positives = 396/909 (43%), Gaps = 163/909 (17%)

Query: 63  EMVKEFTNFFDEKGHTPVKRSPVVAKRWRDDILLTIASIAVFQPWVTSGLVKPVKNPLVI 122
           E+ + F +FF  KGH  V  S +V       +L T A +  F+  V  GL K   +    
Sbjct: 7   EIRQAFLDFFHSKGHQVVASSSLVPNN-DPTLLFTNAGMNQFKD-VFLGLDKRAYSRATT 64

Query: 123 AQPCIRL----NDIDNVGRTGRHLTCFTMGAHHAFNSKDDYKY------WTDKTVEYCFE 172
           +Q C+R     ND++NVG T RH T F M  + +F   D +K+      W   T E  F 
Sbjct: 65  SQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFG--DYFKHDAISFAWELLTGENWFN 122

Query: 173 L--------------------MQRLGIDGKTITFI----------ESWWEGG--GNAGPC 200
           L                     +++G+  + I  I          +++W+ G  G  GPC
Sbjct: 123 LPKERLWVTVYETDDEAFDIWQKQIGVPAERIIRIGDNKGAAFASDNFWQMGDTGPCGPC 182

Query: 201 YEVI-THG------------------VELATLVFMQYKKIGNDYE-EIPLKIVDTGYGIE 240
            E+   HG                  +E+  +VFMQ+ +  +     +P   VDTG G+E
Sbjct: 183 TEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQSDGTMLPLPKPSVDTGMGLE 242

Query: 241 RFAWASQGTPTVYE-SLFSEIIEKLKEDAGIPEVDEKIMAESATLAGLMDIENVGDLRVL 299
           R A   Q   + YE  LFS +I                 A  A + G +D+ N   LRV 
Sbjct: 243 RIAAVLQHVNSNYEIDLFSTLI-----------------AAVAKVTGAVDLNNKS-LRV- 283

Query: 300 RQKVAEKIGMDVDELDKLISPLEYIYAIADHTRCLSFMFGDGIVPSNVKEGYLARLVLRK 359
                                      IADH R  +F+  DG+ PSN   GY+ R ++R+
Sbjct: 284 ---------------------------IADHIRSCAFLVSDGVTPSNEGRGYVLRRIIRR 316

Query: 360 TLRYMEKIGISMSI-KDIISMQLENMKEIYPELSAMKEYIMDVLDAEEKKYIQTVNRGRG 418
            +R+   +G   S    +++  +E M     EL   +  +  VL  EE ++ +T+ RG  
Sbjct: 317 AVRHGNMLGAKDSFFYKLVAPLIEVMGPAADELKRQQSLVEQVLKTEEDQFARTLERGLT 376

Query: 419 IVERMAASKSEITLDD--LIELYDSNGLPPEIVKDVVDDLNKKGKKTIAITVPDNFYTIV 476
           +++   A+    TLD      LYD+ G P ++  DV  +   K        V +  + + 
Sbjct: 377 LLDEELANLQGDTLDGETAFRLYDTYGFPVDLTADVCRERGLK--------VDEAGFELA 428

Query: 477 AERHEEEKPEEVVSTKKELPELEVS-KTELLFFKHPTQVEFEAKVLKIV----------- 524
            E       E           + V   ++   + H  Q   ++ V+ +            
Sbjct: 429 MEAQRRRARESSGFGADYNSMIRVDGASQFCGYDHEQQ---QSTVIALFRDGQSVNEIHA 485

Query: 525 --EKYVVLDKTLFYAEGGGQKYDIGQLN----DIEVMDVQKKNGIVFH--KVSDISKFKE 576
             E  VVLD+T FY E GGQ  D G L     D EV D QK    + H  K+S  S  K 
Sbjct: 486 GEEAVVVLDETPFYGESGGQVGDKGVLKAAGADFEVSDTQKYGQAIGHQGKLSQGS-LKV 544

Query: 577 GDTVKGAVNWDNRLKLMRNHTATHVINAAATRVLGKHVWQTGSNVDTEKGRLDITHYERI 636
            D V   ++   R ++  NH+ATH+++AA  + LG+HV Q GS V+ +  R D +H+E +
Sbjct: 545 NDRVDAQIDTVRRNRIRLNHSATHLLHAALRQTLGEHVAQKGSLVNDKYLRFDFSHFEAM 604

Query: 637 SREQVKEIERIANEIVLSKMPVNSTFMDRNDAEQKYGFTIYQGGVVPGDTLRIIEIEGTD 696
             EQ++ +E + N+ +   +PV +  M  +DA++K    ++  G    D +R++ +    
Sbjct: 605 KPEQIRIVEDLVNQQIRRNLPVQTEVMALDDAKEKGAMALF--GEKYDDNVRVLTMGDFS 662

Query: 697 VEACGGTHCSNTSECGYIKVLKTERIQDGVERLEYSTGMGSVSEIASLEDTLIDSAEILG 756
            E CGGTH S T + G  ++L       G+ R+E  TG G+++ +    D L D A ++ 
Sbjct: 663 TELCGGTHASRTGDIGLFRILSESGTAAGIRRIEAVTGEGAIATLHQQNDLLQDVAHLVK 722

Query: 757 IPNDQLPKTVKRFFEEWKEQKKTIEELQKKVGELVKYELADKFENVGNYEVLVEQVSGT- 815
             ++ L   V+   +  +  +K +++L+ +        L+ K + V    +LV ++    
Sbjct: 723 GDSNNLTDKVRAVLDRTRALEKELQQLKDQQAAQESASLSSKAKMVNGVPLLVSKLDNVE 782

Query: 816 PNELMSIADNL--AVGNKLIVL-MNENDYLLCKRGENVELSMK----DLIRNI-----GK 863
           P  L ++ D+L   +G+ +IVL    +D +    G   +L+ +    +LI N+     GK
Sbjct: 783 PKMLRTMVDDLKNQLGSAIIVLATTADDKVSLIAGVTKDLTDRVKAGELIGNVAQQVGGK 842

Query: 864 GGGKDNLAQ 872
           GGG+ ++AQ
Sbjct: 843 GGGRPDMAQ 851