Pairwise Alignments

Query, 892 a.a., alanine--tRNA ligase from Methanococcus maripaludis S2

Subject, 865 a.a., Alanine--tRNA ligase from Alteromonas macleodii MIT1002

 Score =  255 bits (652), Expect = 7e-72
 Identities = 235/918 (25%), Positives = 400/918 (43%), Gaps = 161/918 (17%)

Query: 63  EMVKEFTNFFDEKGHTPVKRSPVVAKRWRDD--ILLTIASIAVFQPWVTSGLVKPVKNPL 120
           ++  +F ++F   GH  V  S +V     DD  +L T A +  F+     G  K      
Sbjct: 7   DLRNKFIDYFKSHGHQAVASSSLVPA---DDPTLLFTNAGMNQFKDCFL-GAEKRSYTRA 62

Query: 121 VIAQPCIRL----NDIDNVGRTGRHLTCFTMGAHHAFNSKDDYKYWTDKTVEYCFELMQR 176
           V +Q C+R     ND++NVG T RH T F M  + +F       Y+  + +E+ +  + +
Sbjct: 63  VSSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGD-----YFKKEAIEFAWNFLTK 117

Query: 177 ---------------------------LGIDGKTITFI---ESWWEGG--GNAGPCYEVI 204
                                      +G+  + I  I   +++W  G  G  GPC E+ 
Sbjct: 118 EIGLPKEKLLVTVYSEDDEAFDIWENHIGVPKEKIIRISTSDNFWSMGDTGPCGPCSEIF 177

Query: 205 -THG------------------VELATLVFMQY-KKIGNDYEEIPLKIVDTGYGIERFAW 244
             HG                  +E+  LVFMQ+ K+     E +P   +DTG G+ER + 
Sbjct: 178 YDHGAHIWGGPPGTPEEDGDRFIEIWNLVFMQFNKQADGTMEPLPKPSIDTGMGLERISA 237

Query: 245 ASQGTPTVYE-SLFSEIIEKLKEDAGIPEVDEKIMAESATLAGLMDIENVGDLRVLRQKV 303
             Q   + YE  LF  +I+                  +A++ G  D+EN   LRV     
Sbjct: 238 ILQNVHSNYEIDLFQNLIKS-----------------AASIVGSEDLENKS-LRV----- 274

Query: 304 AEKIGMDVDELDKLISPLEYIYAIADHTRCLSFMFGDGIVPSNVKEGYLARLVLRKTLRY 363
                                  IADH R  SF+  DG++PSN   GY+ R ++R+ +R+
Sbjct: 275 -----------------------IADHIRSCSFLICDGVMPSNEGRGYVLRRIIRRAVRH 311

Query: 364 MEKIGIS-MSIKDIISMQLENMKEIYPELSAMKEYIMDVLDAEEKKYIQTVNRGRGIVER 422
             ++G + +    +++   + M E YPEL      I  VL  EE+++ +T+ RG  I+  
Sbjct: 312 GYQLGANDIFFYKLVASLAKEMGEAYPELVDQLPVIEKVLRVEEEQFSKTLARGMAILND 371

Query: 423 MAASKSEITL--DDLIELYDSNGLPPEIVKDVVDDLNKKGKKTIAITVPDNFYTIVAERH 480
              +    T+  D + +LYD+ G P ++  DV  + + K        + +  +    +  
Sbjct: 372 TLETLEGDTVPGDVVFKLYDTYGFPTDLTNDVAREHDLK--------IDEEGFEAAMQAQ 423

Query: 481 EEEKPEEVVSTKKELPELEVSKTELLFFKHPTQVEFEAKVLKIV-------------EKY 527
                +          +L +  T    F   T VE +A V++++             E  
Sbjct: 424 RARAQQASNFGADYNSKLAIDHTTS--FTGYTDVEGQANVVELIADNAFVEKLEDGQEGV 481

Query: 528 VVLDKTLFYAEGGGQKYDIGQLN----DIEVMDVQKKNGIVFHKVSDISKFKEGDTVKGA 583
           VVLD T FYAE GGQ  D G L     +  V D QK      HK        +GDT   A
Sbjct: 482 VVLDSTPFYAESGGQAGDKGVLRVANGEFIVTDTQKMGNAFAHKGIAKGSVSKGDTATAA 541

Query: 584 VNWDNRLKLMRNHTATHVINAAATRVLGKHVWQTGSNVDTEKGRLDITHYERISREQVKE 643
           ++  NR  + +NH+ATH+++AA   +LG+HV Q GS V+  + R D +H+E ++ EQ+ E
Sbjct: 542 IDAANREAIKKNHSATHLLHAALREILGEHVTQKGSLVEAPRMRFDFSHFEAVTAEQLAE 601

Query: 644 IERIANEIVLSKMPVNSTFMDRNDAEQKYGFTIYQGGVVPGDTLRIIEIEGTDVEACGGT 703
           IER  N+ + +   + +  MD ++A+      ++  G    + +R++ +    VE CGGT
Sbjct: 602 IERRVNQEIRANHTLATELMDLDEAKASGAMALF--GEKYDEKVRVVTMGPFSVELCGGT 659

Query: 704 HCSNTSECGYIKVLKTERIQDGVERLEYSTGMGSVSEIASLEDTLIDSAEILGIPNDQLP 763
           H + T + G  K+     I  GV R+E  TG  ++  + + + TL   + +L   +  + 
Sbjct: 660 HVTRTGDIGLFKITSEAGIASGVRRIEAVTGEHALEVVQTQQATLSSLSALLKTDSQNVL 719

Query: 764 KTVKRFFEEWKEQKKTIEELQKKVGELVKYELADKFENVGNYEVLVEQVSGT-PNELMSI 822
             V     + KE +K +   ++K+      ++      +   +VL+  + G     L S+
Sbjct: 720 DRVVSLQNQTKELEKALNSAKQKLASQQGADMLSNAVEINGVKVLIANLEGVEAKSLRSM 779

Query: 823 ADNL--AVGNKLIVLMNEND---YLLCKRGENVELSMK--DLIRNI-----GKGGGKDNL 870
            D++   +G  ++VL   ND    L+    +N+   +K  +L+  +     GKGGG+ ++
Sbjct: 780 MDDIKNRIGEGIVVLGVANDAKVNLIAGVTKNLTSKVKAGELVNFVASQVGGKGGGRPDM 839

Query: 871 AQ--GKYSENKEQITEKI 886
           AQ  G   EN  Q  + +
Sbjct: 840 AQAGGDQPENLGQALDSV 857