Pairwise Alignments

Query, 892 a.a., alanine--tRNA ligase from Methanococcus maripaludis S2

Subject, 887 a.a., alanyl-tRNA synthetase from Agrobacterium fabrum C58

 Score =  241 bits (614), Expect = 2e-67
 Identities = 234/926 (25%), Positives = 403/926 (43%), Gaps = 180/926 (19%)

Query: 62  NEMVKEFTNFFDEKGHTPVKRSPVVAKRWRDDILLTIASIAVFQPWVTSGLVKPVKNPLV 121
           NE+   F ++F + GH  V  SP+V +     ++ T A +  F+  V +GL     +   
Sbjct: 5   NEIRSTFLDYFKKNGHEIVPSSPLVPRN-DPTLMFTNAGMVQFKN-VFTGLESRPYSTAA 62

Query: 122 IAQPCIRL----NDIDNVGRTGRHLTCFTMGAHHAFNSKDDYKYWTDKTVEYCFELMQR- 176
            AQ C+R     ND+DNVG T RH T F M  + +F       Y+ ++ + + + L+ + 
Sbjct: 63  SAQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGD-----YFKEEAITHAWNLITKE 117

Query: 177 LGIDGKTITFI-----------------------------ESWWEGG--GNAGPCYEVI- 204
            GID   +                                +++W  G  G  GPC E+  
Sbjct: 118 FGIDRNRLLVTVYHTDDEAFNLWKKIAGFSDDRIIRIPTSDNFWAMGDTGPCGPCSEIFY 177

Query: 205 THG------------------VELATLVFMQYKKIGNDYE-EIPLKIVDTGYGIERFAWA 245
            HG                  +E+  LVFMQY+++  +   ++P   +DTG G+ER +  
Sbjct: 178 DHGDHIWGGPPGSPEEDGDRFIEIWNLVFMQYEQLTKEERIDLPRPSIDTGMGLERISAL 237

Query: 246 SQGTPTVYES-LFSEIIEKLKEDAGIPEVDEKIMAESATLAGLMDIENVGDLRVLRQKVA 304
            QG    Y++ LF  +I    E  G+P   E                          + +
Sbjct: 238 LQGKHDNYDTDLFRALIAASVEATGVPAEGE-------------------------HRAS 272

Query: 305 EKIGMDVDELDKLISPLEYIYAIADHTRCLSFMFGDGIVPSNVKEGYLARLVLRKTLRYM 364
            ++                   IADH R  +F+  DG++PS+   GY+ R ++R+ +R+ 
Sbjct: 273 HRV-------------------IADHLRSSAFLIADGVLPSSEGRGYVLRRIMRRAMRHA 313

Query: 365 EKIGI-SMSIKDIISMQLENMKEIYPELSAMKEYIMDVLDAEEKKYIQTVNRGRGIVERM 423
           E +G     I  ++   ++ M   YPEL   +  I + L  EE ++ +T+ RG  ++   
Sbjct: 314 ELLGSRDPLIYRLLPALIQQMGRAYPELVRAEALISETLKLEETRFRKTLERGLSLLSDA 373

Query: 424 AASKSEITLDD---LIELYDSNGLPPEIVKDVVDDLNKKGKKTIAITVPDNFYTIVAERH 480
            ++  +  + D     +LYD+ G P ++ +D +        +   I V  + +T   +R 
Sbjct: 374 TSTLHKGDMLDGETAFKLYDTYGFPLDLTQDAL--------RAREIGVDISGFTDAMQRQ 425

Query: 481 EEEKPEEVVSTKKELPEL-------EVSKTELLFFKHPTQVEFEAKVLKIVEK------- 526
           + E       +  +  E        +   TE L +   +    E  +  IV         
Sbjct: 426 KAEARSHWAGSGDKATETVWFELKEKFGATEFLGYDTESA---EGVIQAIVRDGKEVDSA 482

Query: 527 ------YVVLDKTLFYAEGGGQKYD----IGQLNDIEVMDVQKKNGIVFHKVSDISK--F 574
                 ++V+++T FY E GGQ  D    +G     +V   QKK   +F     +SK   
Sbjct: 483 AEGETVHIVVNQTPFYGESGGQMGDTGVIVGDAGTFDVSGTQKKGEGLFVHSGTVSKGGL 542

Query: 575 KEGDTVKGAVNWDNRLKLMRNHTATHVINAAATRVLGKHVWQTGSNVDTEKGRLDITHYE 634
           K  + V+  V+ D R +L  NH+ATH+++ A   VLG HV Q GS V  E+ R D++H +
Sbjct: 543 KVNEAVQLTVDHDRRSRLRANHSATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSHPK 602

Query: 635 RISREQVKEIERIANEIVLSKMPVNSTFMDRNDAEQKYGFTIYQGGVVPGDTLRIIEIEG 694
            +S E++K +E +ANEIVL   PV +  M  +DA  +    ++  G   GD +R++ + G
Sbjct: 603 PMSAEELKVVEDMANEIVLQNSPVVTRLMSVDDAIAEGAMALF--GEKYGDEVRVVSM-G 659

Query: 695 T-----------DVEACGGTHCSNTSECGYIKVLKTERIQDGVERLEYSTGMGSVSEIAS 743
           T            VE CGGTH + T + G I++L    +  GV RLE  TG G+++ +A 
Sbjct: 660 TGLHGAKANRPYSVELCGGTHVAATGQIGLIRILGESAVGSGVRRLEAVTGQGALAYLAE 719

Query: 744 LEDTLIDSAEILGIPNDQLPKTVKRFFEEWKEQKKTIEELQKK--VGELVKYELADKFEN 801
            ++ +   A  L +    +   V+   +E K+ ++ + + +KK  +G       A+  + 
Sbjct: 720 QDERVKALASSLKVQPGDVLSRVEGLLDERKKLERELADARKKLAMGGGSSDAGANDVQQ 779

Query: 802 VGNYEVLVEQVSG-TPNELMSIAD----NLAVGNKLIVLMNENDYLLCKRGENVEL---- 852
           V     L + +SG    +L  +AD    NL  G  L++ ++++           +L    
Sbjct: 780 VAGVNFLAKSLSGIDAKDLKGLADEAKANLGSGVVLLIAVSDDGKASAVAAVTEDLTGRF 839

Query: 853 SMKDLIRNI-----GK-GGGKDNLAQ 872
           S  D++R       GK GGG+ ++AQ
Sbjct: 840 SAVDIVRTASAALGGKGGGGRPDMAQ 865