Pairwise Alignments

Query, 54 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 689 a.a., Iron-sulfur cluster-binding protein from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 43.1 bits (100), Expect = 3e-09
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 11  CGACVGVCKSMAI--ELIENKLYIEEEKCNNCKLCTVVCPVNAL 52
           C ACV +C ++AI  E+  N++ +    C  C  CT VCP  AL
Sbjct: 311 CNACVEICSALAIHSEIKRNQIVVNPNLCVGCGACTTVCPTGAL 354



 Score = 37.4 bits (85), Expect = 1e-07
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 1   MKVNYSKCGYCGACVGVCKSMAIE--LIENKLYIEEEKCNNCKLCTVVCPVNAL 52
           ++VN  +C  C +CV  C + A++      +L   E+ C  C LC   CP +A+
Sbjct: 553 IEVNKDRCTLCLSCVSACPASALQDNTERPQLRFIEKNCVQCGLCASTCPEDAI 606



 Score = 27.7 bits (60), Expect = 1e-04
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 3/45 (6%)

Query: 3   VNYSKCGYCGACVGVCKSMAIELIENKLYIEEEKCNNCKLCTVVC 47
           ++   C  C ACV  C   AI L      I+ ++C + + C   C
Sbjct: 181 IDLDLCTRCNACVAACPEGAIGL---DYQIDLDQCRDHRACVKAC 222



 Score = 25.8 bits (55), Expect = 4e-04
 Identities = 7/23 (30%), Positives = 14/23 (60%)

Query: 32  IEEEKCNNCKLCTVVCPVNALEE 54
           + +++C  C  C   CP +AL++
Sbjct: 555 VNKDRCTLCLSCVSACPASALQD 577



 Score = 24.3 bits (51), Expect = 0.001
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query: 3   VNYSKCGYCGACVGVCKSMAI 23
           VN + C  CGAC  VC + A+
Sbjct: 334 VNPNLCVGCGACTTVCPTGAL 354