Pairwise Alignments

Query, 54 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

Subject, 352 a.a., 4Fe-4S binding protein from Methanococcus maripaludis S2

 Score = 47.0 bits (110), Expect = 1e-10
 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 3/48 (6%)

Query: 8   CGYCGACVGVCKSMAIEL---IENKLYIEEEKCNNCKLCTVVCPVNAL 52
           C  CG C  +C + AIE+    E +L I+E  CN C  C  VCP NAL
Sbjct: 242 CVSCGWCANICPADAIEVEKPFEGELIIDEPACNACGACISVCPCNAL 289



 Score = 40.4 bits (93), Expect = 9e-09
 Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 11/57 (19%)

Query: 8   CGYCGACVGVCKSMAIELIEN-----------KLYIEEEKCNNCKLCTVVCPVNALE 53
           C  CG C   C + AIELI N            + I+ + C  CK+C   CP NA+E
Sbjct: 154 CVLCGICAEYCPADAIELIPNDMNALSLNPIADIKIDLDACVYCKVCEKACPHNAIE 210



 Score = 38.9 bits (89), Expect = 3e-08
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 10/63 (15%)

Query: 1   MKVNYSKCGYCGACVGVCKSMAIE----------LIENKLYIEEEKCNNCKLCTVVCPVN 50
           +++N SKC  C  C  VC   AI+          L+  ++ I+++ C  C +C   CP +
Sbjct: 108 IELNQSKCVLCEQCELVCPQCAIDVEREVPERKSLVLGEITIKKDDCVLCGICAEYCPAD 167

Query: 51  ALE 53
           A+E
Sbjct: 168 AIE 170



 Score = 36.6 bits (83), Expect = 1e-07
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 19/72 (26%)

Query: 1   MKVNYSKCGYCGACVGVCKSMAIELI-----------ENKLY--------IEEEKCNNCK 41
           +K++   C YC  C   C   AIE I           + +LY        I++E C +C 
Sbjct: 187 IKIDLDACVYCKVCEKACPHNAIEAICYKCPLASKIKKPELYGEIKGQTNIDKELCVSCG 246

Query: 42  LCTVVCPVNALE 53
            C  +CP +A+E
Sbjct: 247 WCANICPADAIE 258



 Score = 36.2 bits (82), Expect = 2e-07
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 8/53 (15%)

Query: 8   CGYCGACVGVCKSMAIELIENK--------LYIEEEKCNNCKLCTVVCPVNAL 52
           C  CGAC+ VC   A+   + +        + + ++ C  C  CT  CPV+AL
Sbjct: 274 CNACGACISVCPCNALVFPQPEKQGDKVPNVVVNQDVCILCGACTHSCPVDAL 326



 Score = 33.1 bits (74), Expect = 1e-06
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 15/62 (24%)

Query: 7   KCGYCGACVGVCKSMAIEL---------------IENKLYIEEEKCNNCKLCTVVCPVNA 51
           KC  CG C   C   A++L               I+  + + + KC  C+ C +VCP  A
Sbjct: 70  KCVLCGMCACACPFDAVKLSINDKPITEMPQYPKIKRGIELNQSKCVLCEQCELVCPQCA 129

Query: 52  LE 53
           ++
Sbjct: 130 ID 131



 Score = 32.7 bits (73), Expect = 2e-06
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 10/56 (17%)

Query: 8  CGYCGACVGVCKSMAIEL----------IENKLYIEEEKCNNCKLCTVVCPVNALE 53
          C  CG C  +C + AIE+          I+       EKC  C +C   CP +A++
Sbjct: 32 CVGCGICSEICPTSAIEMGPLGAIFKGDIDAPKLDISEKCVLCGMCACACPFDAVK 87



 Score = 24.3 bits (51), Expect = 7e-04
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 3   VNYSKCGYCGACVGVCKSMAIELIENKLYIEE 34
           VN   C  CGAC   C   A+ +   K+ + E
Sbjct: 306 VNQDVCILCGACTHSCPVDALTVKRTKINMTE 337