Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 555 a.a., energy-dependent translational throttle protein EttA from Rhodanobacter sp000427505 FW510-R12

 Score = 92.8 bits (229), Expect = 3e-23
 Identities = 121/500 (24%), Positives = 204/500 (40%), Gaps = 93/500 (18%)

Query: 103 GLLGPNGVGKSTIIKALSG-----------EMVLNLNDLTETPDMKK------------- 138
           GLLG NG GKST++K ++G           +    +  L + PD+               
Sbjct: 37  GLLGVNGAGKSTVLKIMAGVDTDFQGEARAQPGTKIGYLAQEPDLNPEKTVREVVEEGVS 96

Query: 139 -VLDYFSGTELQNYFEKLKNNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKII 197
            VLD  +   L+  +     +G       +  + L  ++       L++     + E   
Sbjct: 97  VVLD--AQKRLEEVYAAYAEDGADFDKLAKEQEQLENLLAANDAHALER-----QLEVAA 149

Query: 198 NALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIRE 257
           +AL +    +     LSGGE +RVA+    L + D+   DEPT+ LD +      + + +
Sbjct: 150 DALRLPP-WEAKVGPLSGGEKRRVALCRLLLSKPDMLLLDEPTNHLDAESVDWLEQFLHD 208

Query: 258 VAEGKKVVAVEHDLIVLDYLSDYIHIM---YGIP--SAYGVVTHPRGTRVG--------- 303
                 VVAV HD   LD  +++I  +    GIP    Y      +  R+          
Sbjct: 209 YPG--TVVAVTHDRYFLDNAAEWILELDRGRGIPWKGNYTEWLEQKDARLKQEANQEKSR 266

Query: 304 ----------INTYLDGFLKEENIRFRK----SPIVFEKR--------PPQDSTNRPLLL 341
                     + +   G   +   R  +    + + +++R        PP +   + ++ 
Sbjct: 267 QKAIAKELEWVRSAAKGRQSKGKARLARFEELNSVDYQRRNETNEIFIPPGERLGQEVI- 325

Query: 342 DYTDISKKLGDFSLNVN-GGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVT--G 398
           ++ +++K  GD  L  +   ++  G ++G++GPNG GK+T +K + G  +PDSGEV    
Sbjct: 326 EFKNVTKSFGDRVLIEDLSFKVPPGAIIGVIGPNGAGKSTLMKMIMGKETPDSGEVKLGH 385

Query: 399 DVKVSYKPQ---------YISSDFEGTVEDLLMSITAIHTSYYKSEI-IKPLALENILDS 448
             K++Y  Q          +  +  G  + L +    I +  Y      K    + I+ S
Sbjct: 386 TTKLAYVDQSREALDPKNNVWQEVSGGSDILTIGNFEIQSRAYIGRFNFKGTDQQKIVGS 445

Query: 449 SVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFV 508
               LSGGE  R+ +A  L Q  ++ L+DEPS  LDVE    T R +     E      V
Sbjct: 446 ----LSGGERGRLHMAKTLLQGGNVLLLDEPSNDLDVE----TLRALEDALLEFPGCAMV 497

Query: 509 VDHDILFQDYISDRFIVFSG 528
           + HD  F D I+   I F G
Sbjct: 498 ISHDRWFLDRIATHIIAFEG 517



 Score = 51.2 bits (121), Expect = 1e-10
 Identities = 50/198 (25%), Positives = 79/198 (39%), Gaps = 47/198 (23%)

Query: 363 YQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGD--VKVSYKPQYISSDFEGTVEDL 420
           + G  +G+LG NG GK+T +K +AGV +   GE       K+ Y  Q    + E TV ++
Sbjct: 31  FPGAKIGLLGVNGAGKSTVLKIMAGVDTDFQGEARAQPGTKIGYLAQEPDLNPEKTVREV 90

Query: 421 LMSITAIHTSYYK--SEIIKPLA---------------LENIL----------------- 446
           +    ++     K   E+    A               LEN+L                 
Sbjct: 91  VEEGVSVVLDAQKRLEEVYAAYAEDGADFDKLAKEQEQLENLLAANDAHALERQLEVAAD 150

Query: 447 -------DSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMA 499
                  ++ V  LSGGE +RV++   L    D+ L+DEP+  LD E    +   + +  
Sbjct: 151 ALRLPPWEAKVGPLSGGEKRRVALCRLLLSKPDMLLLDEPTNHLDAE----SVDWLEQFL 206

Query: 500 DEKEAAMFVVDHDILFQD 517
            +    +  V HD  F D
Sbjct: 207 HDYPGTVVAVTHDRYFLD 224



 Score = 44.7 bits (104), Expect = 1e-08
 Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 32/191 (16%)

Query: 97  PRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLK 156
           P   + G++GPNG GKST++K + G+         ETPD  +V     G   +  +    
Sbjct: 348 PPGAIIGVIGPNGAGKSTLMKMIMGK---------ETPDSGEVK---LGHTTKLAYVDQS 395

Query: 157 NNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDRTFDQ---- 212
              + P +     +V  +V  G        +   G FE I +   I     +  DQ    
Sbjct: 396 REALDPKN-----NVWQEVSGG------SDILTIGNFE-IQSRAYIGRFNFKGTDQQKIV 443

Query: 213 --LSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAEGKKVVAVEHD 270
             LSGGE  R+ +A   L+ G++   DEP++ LDV+   +    + E      V++  HD
Sbjct: 444 GSLSGGERGRLHMAKTLLQGGNVLLLDEPSNDLDVETLRALEDALLEFPGCAMVIS--HD 501

Query: 271 LIVLDYLSDYI 281
              LD ++ +I
Sbjct: 502 RWFLDRIATHI 512