Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 636 a.a., ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score = 82.0 bits (201), Expect = 7e-20
 Identities = 114/484 (23%), Positives = 188/484 (38%), Gaps = 76/484 (15%)

Query: 103 GLLGPNGVGKSTIIKALSGEMVLNLNDLTETPD-----MKKVLDYFSGTELQNYFEKLKN 157
           GL+G NG GKST+   L GE+  +  D     D     M++ +D      +    +    
Sbjct: 31  GLIGANGAGKSTLFALLLGELTPDSGDCLLPADWRIAHMRQEIDTLDRIAIDYVLDG--- 87

Query: 158 NGIKPIHKPQYVDVLPKVVKGKVG----ELLKKVDEKGEF------EKIINALEISNI-L 206
                +   Q    L +  K + G     L  ++D    +       K++  L  +N  +
Sbjct: 88  ----DLRLRQVQHDLAEAEKAQDGAAQARLHSELDSADGYTADARARKMLAGLGFTNEQM 143

Query: 207 DRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAEGKKVVA 266
           DR     SGG   R+ +A A +   D+   DEPT+ LD+         ++       ++ 
Sbjct: 144 DRPVADFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLDAILWLEDFLKNYQG--TLLL 201

Query: 267 VEHDLIVLDYLSDYI-HIMYGIPSAY--GVVTHPRGT-----------------RVGINT 306
           + HD   LD + D I H+     + Y  G     R                   R  + +
Sbjct: 202 ISHDRDFLDAVVDNIAHVEQKKITLYRGGYTAFERARAERLAQQQQAYEKQQAQRAHMES 261

Query: 307 YLDGF-------------------LKEENIRFRKSPIVFEKRPPQDSTNRPLLLDYTDIS 347
           Y+  F                   ++E +     SP  F  R     ++   LLD +D  
Sbjct: 262 YIARFKAQATKARQAQSRIKALERMEELSAAHVDSPFDFVFRESVKISSP--LLDLSDAR 319

Query: 348 KKLGDFS-LNVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVT--GDVKVSY 404
              GD + L     Q+  G  +G+LGPNG GK+T +K L+G +SP +G +T   +  V Y
Sbjct: 320 LGYGDKTILEKVKLQLTPGARIGLLGPNGAGKSTLIKNLSGELSPLAGRLTRGENTVVGY 379

Query: 405 KPQYISSDFEGTVEDL--LMSITAIHTSYYKSEIIKPLALENI-LDSSVKDLSGGELQRV 461
             Q+     +     L  L  +          + +         +D  V + SGGE  R+
Sbjct: 380 FAQHQLDSLDSKASPLLHLQRLAPTEREQTLRDFLGGFDFRGARIDEPVLNFSGGEKARL 439

Query: 462 SIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISD 521
           ++A       +L L+DEP+  LD+E RL  +  ++    E   A+ VV HD       +D
Sbjct: 440 ALALIAWDRPNLLLLDEPTNHLDLEMRLALTMALQ----EFSGAVLVVSHDRHLLKSTTD 495

Query: 522 RFIV 525
            F++
Sbjct: 496 NFLL 499



 Score = 52.0 bits (123), Expect = 7e-11
 Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 39/195 (20%)

Query: 362 IYQGEVVGILGPNGIGKTTFVKALAGVISPDSGE--VTGDVKVSYKPQYISS------DF 413
           ++ G   G++G NG GK+T    L G ++PDSG+  +  D ++++  Q I +      D+
Sbjct: 24  LHAGHKAGLIGANGAGKSTLFALLLGELTPDSGDCLLPADWRIAHMRQEIDTLDRIAIDY 83

Query: 414 ----------------------EGTVEDLLMSITAIHTSYYKS----EIIKPLALEN-IL 446
                                 +G  +  L S       Y       +++  L   N  +
Sbjct: 84  VLDGDLRLRQVQHDLAEAEKAQDGAAQARLHSELDSADGYTADARARKMLAGLGFTNEQM 143

Query: 447 DSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAM 506
           D  V D SGG   R+++A  L   +DL L+DEP+  LD++  L     ++      +  +
Sbjct: 144 DRPVADFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLDAILWLEDFLKNY----QGTL 199

Query: 507 FVVDHDILFQDYISD 521
            ++ HD  F D + D
Sbjct: 200 LLISHDRDFLDAVVD 214