Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 577 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 89.0 bits (219), Expect = 5e-22
 Identities = 124/517 (23%), Positives = 217/517 (41%), Gaps = 98/517 (18%)

Query: 94  LITPRDGVTGLLGPNGVGKST----IIKALSGEMVLNLNDLTETPDMKKV----LDYFSG 145
           L   R     L+G +G GKST    +++ L+   VL  +   +  D+  +    L    G
Sbjct: 38  LTLQRGETLALVGESGCGKSTTALALLRLLAPGAVLRGSIQFDGRDILALSPAQLREVRG 97

Query: 146 TELQNYFEKLKNNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNI 205
            E+   F++   + + P+H           +  ++ E L++ ++         A+E+ ++
Sbjct: 98  REISMIFQEPMTS-LNPVH----------TIGTQIEETLRRHEKLSALAARKRAIELLDL 146

Query: 206 ---------LDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIR 256
                    +D     LSGG+ QRV IA A   +  +   DEPT+ LDV    +    I 
Sbjct: 147 VRIPEPHQRIDDHPHNLSGGQRQRVMIAMAVACKPRLLVADEPTTALDV----TIQAQIL 202

Query: 257 EVAEGKK------VVAVEHDLIVLDYLSDYIHIMYG--------------IPS-AY---- 291
           E+ +G +      ++ + HDL ++   +D + +MYG               PS AY    
Sbjct: 203 ELLDGLRRELDMALLLITHDLGLVAQWADRVAVMYGGEKVEEASTSRLFAAPSHAYTRGL 262

Query: 292 -------GVVTHPRGTRVG-INTYLDGFLKEENIRFRKSPIVFEKR--PPQDSTNRPLLL 341
                  G   H    R+  I T LD    E +          + R  P + +   PLL 
Sbjct: 263 LGASLHAGSALHYVDARLPEIQTRLDAATGERSFALHVPEPNSKVRALPVRTAAAEPLLS 322

Query: 342 DY---TDISKKLGDFSLNVNGGQ--IYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEV 396
                TD  K+ G     V+G    I  GE VG++G +G GK+T  + L  +++P SG +
Sbjct: 323 VQDLRTDYPKRGGGVLHAVDGVSFDIRAGETVGLVGESGCGKSTLSRTLLRLVNPASGRI 382

Query: 397 TGD------------------VKVSYKPQYISSDFEGTVEDLLMSITAIHTSYYKSEIIK 438
             D                  V++ ++  Y S +   +V D++ S+  +H    ++E   
Sbjct: 383 VFDGTDIAQLSEKALKPWRRRVQMVFQDPYASLNPRRSVFDIIESVLKVHGVADRAERRN 442

Query: 439 PLA--LENI---LDSSVK---DLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLT 490
            +A  LE +    D+  +   + SGG+ QR+ IA  L     L ++DEP + LDV  +  
Sbjct: 443 RIAAILERVGLPADAGRRFPNEFSGGQRQRIGIARALVLRPSLVVLDEPVSALDVSVQAQ 502

Query: 491 TSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIVFS 527
              ++  + ++   +   + HD+    YI+DR +V S
Sbjct: 503 ILNLLVELKEDFGLSYLFISHDLSVVRYIADRVMVMS 539



 Score = 47.8 bits (112), Expect = 1e-09
 Identities = 46/199 (23%), Positives = 87/199 (43%), Gaps = 32/199 (16%)

Query: 362 IYQGEVVGILGPNGIGKTTFVKALAGVISPDS---GEVTGDVK--VSYKPQYISS----D 412
           + +GE + ++G +G GK+T   AL  +++P +   G +  D +  ++  P  +      +
Sbjct: 40  LQRGETLALVGESGCGKSTTALALLRLLAPGAVLRGSIQFDGRDILALSPAQLREVRGRE 99

Query: 413 FEGTVEDLLMSITAIHTSYYKSE-----------------IIKPLALENI------LDSS 449
                ++ + S+  +HT   + E                  I+ L L  I      +D  
Sbjct: 100 ISMIFQEPMTSLNPVHTIGTQIEETLRRHEKLSALAARKRAIELLDLVRIPEPHQRIDDH 159

Query: 450 VKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVV 509
             +LSGG+ QRV IA  ++    L + DEP+  LDV  +     ++  +  E + A+ ++
Sbjct: 160 PHNLSGGQRQRVMIAMAVACKPRLLVADEPTTALDVTIQAQILELLDGLRRELDMALLLI 219

Query: 510 DHDILFQDYISDRFIVFSG 528
            HD+      +DR  V  G
Sbjct: 220 THDLGLVAQWADRVAVMYG 238