Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 264 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Variovorax sp. SCN45

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 32/208 (15%)

Query: 362 IYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGD--------------VKVSYKPQ 407
           + +GEVVG+LGPNG GKTT    + G++  D+G++T D              + +SY PQ
Sbjct: 40  VQKGEVVGLLGPNGAGKTTSFYMIVGLVRADAGDITIDGEPIAHMPIHRRARMGLSYLPQ 99

Query: 408 YISSDFEGTVED----------------LLMSITAIHTSYYKSEIIKPLALENILDSSVK 451
             S   + TVE+                 LM ++  H     SE++  L ++++ DS   
Sbjct: 100 EASIFRKLTVEENVRAVLELQQEPDASGKLMPLSKQHMEERLSELLADLRVDHLRDSPAL 159

Query: 452 DLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDH 511
            LSGGE +RV IA  L+      L+DEP A +D    +   R+I     E+   + + DH
Sbjct: 160 ALSGGERRRVEIARALATQPRFILLDEPFAGIDPIAVIEIQRII-SFLKERGIGVLITDH 218

Query: 512 DILFQDYISDR-FIVFSGIAGSSGTGSE 538
           ++     I D  FI+  G   + GT SE
Sbjct: 219 NVRETLGICDHAFIISDGHVLAQGTPSE 246



 Score = 46.2 bits (108), Expect = 2e-09
 Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 21/184 (11%)

Query: 101 VTGLLGPNGVGKST-------IIKALSGEMVLNLNDLTETPDMKKV---LDYFSGTELQN 150
           V GLLGPNG GK+T       +++A +G++ ++   +   P  ++    L Y    +  +
Sbjct: 45  VVGLLGPNGAGKTTSFYMIVGLVRADAGDITIDGEPIAHMPIHRRARMGLSYL--PQEAS 102

Query: 151 YFEKL--KNNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDR 208
            F KL  + N    +   Q  D   K++       L K   +    +++  L + ++ D 
Sbjct: 103 IFRKLTVEENVRAVLELQQEPDASGKLMP------LSKQHMEERLSELLADLRVDHLRDS 156

Query: 209 TFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAE-GKKVVAV 267
               LSGGE +RV IA A   +      DEP + +D        ++I  + E G  V+  
Sbjct: 157 PALALSGGERRRVEIARALATQPRFILLDEPFAGIDPIAVIEIQRIISFLKERGIGVLIT 216

Query: 268 EHDL 271
           +H++
Sbjct: 217 DHNV 220