Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 906 a.a., ribosome-associated ATPase from Pseudomonas putida KT2440

 Score = 90.5 bits (223), Expect = 3e-22
 Identities = 99/463 (21%), Positives = 190/463 (41%), Gaps = 36/463 (7%)

Query: 75  LTDDRIVHSYGQN-RFRLYGLITPRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLTET 133
           L  + I H YG        G   P      L+GP+G GKST++  ++G   L   +L   
Sbjct: 6   LLAEGISHRYGDLIALHPLGFSLPVGTRCALIGPDGAGKSTLLGLIAGVKRLQQGELQVL 65

Query: 134 PDMKKVLDYFSGTELQNYF--EKLKNNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKG 191
               +   + +    +  F  + L NN    +   + +     +        L + + + 
Sbjct: 66  GGSIRQRRHRTALYPKVAFMPQGLGNNLYPELSISENIRFFATLFG------LGRRECEQ 119

Query: 192 EFEKIINALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSA 251
               ++ A ++ +   R   +LSGG  Q++ +  A + E D+   DEPT+ +D   R   
Sbjct: 120 RMANLLQATDLQHFAQRPAGKLSGGMKQKLGLCCALIHEPDLLILDEPTTGVDPLSRRRF 179

Query: 252 AKVIREVAEGKKVVAVEHDLIVLDYLSDYIHIMY---GIPSAYGVVTHPRGTRVGINTYL 308
            +++ +V   +  + +      ++    + H +    G   A G  +H            
Sbjct: 180 WELVEQVRAQRPQLTLLVATAYMEEAEQFEHCLMLDGGRLLAAG-PSHELAAVTSSGKLD 238

Query: 309 DGFLKEENI-RFRKSPIVFEKRPPQDSTNRPLLLDYTDISKKLGDF-SLNVNGGQIYQGE 366
           D F   +   + +  P+     PP+ +T+ P+ ++  D++ + GDF ++N     I +GE
Sbjct: 239 DAFTHYQGAGKAQHQPLAI---PPRQATDGPVAIEAHDLTLRFGDFTAVNKVSFAIGRGE 295

Query: 367 VVGILGPNGIGKTTFVKALAGVISPDSGEVT--------GDVKVSYKPQYISSDFEGTVE 418
           + G LG NG GKTT +K L G++    G  +         D+    +  ++S  F    E
Sbjct: 296 IFGFLGSNGCGKTTTMKVLTGLMPASEGSASLLGRPVDASDLATRKRVGFMSQSFSLYGE 355

Query: 419 DLLMSITAIHTSYYK----------SEIIKPLALENILDSSVKDLSGGELQRVSIAACLS 468
                  A+H   +            E+I+   L  I D     L  G  QR+S+A  + 
Sbjct: 356 LSTRQNLALHARLFDLPKAESAQRIDELIERFDLAAIADQPSGALPLGLRQRLSLAVAVL 415

Query: 469 QDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDH 511
              ++ ++DEP++ +D   R    R++  ++ E+   +F+  H
Sbjct: 416 HRPEVLILDEPTSGVDPAARDDFWRLLVELSREQGVTIFLSTH 458



 Score = 46.2 bits (108), Expect = 6e-09
 Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 24/172 (13%)

Query: 336 NRPLLLDYTDISKKLGDF-SLNVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSG 394
           N P LL    IS + GD  +L+  G  +  G    ++GP+G GK+T +  +AGV     G
Sbjct: 2   NAPALLA-EGISHRYGDLIALHPLGFSLPVGTRCALIGPDGAGKSTLLGLIAGVKRLQQG 60

Query: 395 EVT---GDV-----------KVSYKPQYISSDF--EGTVED------LLMSITAIHTSYY 432
           E+    G +           KV++ PQ + ++   E ++ +       L  +        
Sbjct: 61  ELQVLGGSIRQRRHRTALYPKVAFMPQGLGNNLYPELSISENIRFFATLFGLGRRECEQR 120

Query: 433 KSEIIKPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLD 484
            + +++   L++        LSGG  Q++ +   L  + DL ++DEP+  +D
Sbjct: 121 MANLLQATDLQHFAQRPAGKLSGGMKQKLGLCCALIHEPDLLILDEPTTGVD 172