Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 312 a.a., ATP-binding cassette domain-containing protein from Methanococcus maripaludis S2

 Score = 84.0 bits (206), Expect = 8e-21
 Identities = 68/188 (36%), Positives = 90/188 (47%), Gaps = 23/188 (12%)

Query: 104 LLGPNGVGKSTIIKAL-------SGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLK 156
           LLGP+G GKS II+ +       SG++  N  D+TE P  K+   Y      QNY     
Sbjct: 30  LLGPSGAGKSVIIQCITGILKPDSGKIYFNGEDITEMPPEKRNFGYVP----QNYALFPN 85

Query: 157 NNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDRTFDQLSGG 216
            N    I          K+ K    E+ KKV E  EF      L IS+ILDR    LSGG
Sbjct: 86  MNVYNNIAYGM------KLRKYSKAEIEKKVMEISEF------LHISHILDRKPTTLSGG 133

Query: 217 ELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDY 276
           E QRVAIA A + +  I   DEPTS LD   + S    ++++ E   V+ + HD +    
Sbjct: 134 EQQRVAIARALVLDPKILLLDEPTSALDTNIKESVISELKKIGELVPVIHITHDFVEAKT 193

Query: 277 LSDYIHIM 284
           L + I I+
Sbjct: 194 LGNQIAIL 201



 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 18/178 (10%)

Query: 340 LLDYTDISKKLGDFSLNVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEV--T 397
           +L   ++ K   +F L     +I     + +LGP+G GK+  ++ + G++ PDSG++   
Sbjct: 1   MLKLENLCKSWKEFQLKSVNLEIENNYCI-LLGPSGAGKSVIIQCITGILKPDSGKIYFN 59

Query: 398 GDVKVSYKPQYISSDFEGTVEDLLMSITAIHT--------SYYKSEIIKP-------LAL 442
           G+      P+  +  +      L  ++   +          Y K+EI K        L +
Sbjct: 60  GEDITEMPPEKRNFGYVPQNYALFPNMNVYNNIAYGMKLRKYSKAEIEKKVMEISEFLHI 119

Query: 443 ENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMAD 500
            +ILD     LSGGE QRV+IA  L  D  + L+DEP++ LD   + +    ++++ +
Sbjct: 120 SHILDRKPTTLSGGEQQRVAIARALVLDPKILLLDEPTSALDTNIKESVISELKKIGE 177