Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 260 a.a., ABC transporter ATP-binding protein from Methanococcus maripaludis S2

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 66/230 (28%), Positives = 108/230 (46%), Gaps = 35/230 (15%)

Query: 347 SKKLGDFSLNVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGDVK----- 401
           +K L D S  ++ G      +  ILGPNG GK+T +K ++G++   SG +T D +     
Sbjct: 14  NKILNDCSFKLDSG------IGCILGPNGAGKSTILKCISGIVPVKSGSITIDGEKTTQM 67

Query: 402 --------VSYKPQYISSDFEGTVEDLLMSITAIHTSYYK----------SEIIKPLALE 443
                   +SY PQ  S +F  TV ++++     H ++            +EI+  L + 
Sbjct: 68  KYKDRSRLISYSPQEFSINFPYTVFEVVLMGRNPHVNFLAGPSKKDEQKVTEILNLLKIS 127

Query: 444 NILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKE 503
           ++ D     LSGG+ + V IA  L QDA L + DEP++FLD + +     VI +++ E  
Sbjct: 128 HLKDKEFISLSGGQKRLVMIATALIQDAKLMIFDEPTSFLDYKNQYLVLSVIEKISKEMN 187

Query: 504 AAMFVVDHD----ILFQD--YISDRFIVFSGIAGSSGTGSEPLQKRAGAN 547
             + +  HD     LF D  ++     + S IA  +    E  Q+  G N
Sbjct: 188 KTVLLSLHDPNLAFLFCDNLFLMKNGKILSEIADKNSVCPENFQELYGIN 237



 Score = 80.5 bits (197), Expect = 8e-20
 Identities = 60/211 (28%), Positives = 106/211 (50%), Gaps = 9/211 (4%)

Query: 78  DRIVHSYGQNRFRLYGLITPRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMK 137
           + I  +YG+N+           G+  +LGPNG GKSTI+K +SG + +    +T   +  
Sbjct: 5   ENINFNYGKNKILNDCSFKLDSGIGCILGPNGAGKSTILKCISGIVPVKSGSITIDGEKT 64

Query: 138 KVLDYFSGTELQNYFEKLKNNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFE--K 195
             + Y   + L +Y  +  +     I+ P  V  +  + +      L    +K E +  +
Sbjct: 65  TQMKYKDRSRLISYSPQEFS-----INFPYTVFEVVLMGRNPHVNFLAGPSKKDEQKVTE 119

Query: 196 IINALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVI 255
           I+N L+IS++ D+ F  LSGG+ + V IA A +++  +  FDEPTS+LD K ++    VI
Sbjct: 120 ILNLLKISHLKDKEFISLSGGQKRLVMIATALIQDAKLMIFDEPTSFLDYKNQYLVLSVI 179

Query: 256 REVAE--GKKVVAVEHDLIVLDYLSDYIHIM 284
            ++++   K V+   HD  +     D + +M
Sbjct: 180 EKISKEMNKTVLLSLHDPNLAFLFCDNLFLM 210