Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 604 a.a., elongation factor 3 from Magnetospirillum magneticum AMB-1

 Score = 92.0 bits (227), Expect = 6e-23
 Identities = 128/503 (25%), Positives = 215/503 (42%), Gaps = 98/503 (19%)

Query: 102 TGLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLKNNGIK 161
           T L+G NG GKST++K L+GE++         PD        SG       E+    G  
Sbjct: 35  TCLVGRNGSGKSTLLKVLAGEIL---------PD--------SG-------ERFVQPGAS 70

Query: 162 PIHKPQYVDVLPKVVKGKVGELLKKV--DEKGEFEKIINALEISNILDRTFDQLSGGELQ 219
               PQ   +L   +   V + L     D+    + +++A+ I    D     LSGGE +
Sbjct: 71  IAVLPQDPIILAPTIADYVAQGLPPAERDQMYRVDAVLDAVGIDGARDPV--ALSGGEGR 128

Query: 220 RVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDYLSD 279
           R A+A A + + D    DEPT+ LD+       + +     G  +V + HD   L+ +S 
Sbjct: 129 RAALARALVGQPDALLLDEPTNHLDLPTILWLEEWLSSY--GGALVMISHDRRFLETVSK 186

Query: 280 Y-IHIMYGIP--SAYGV-----------------------------------VTHPRGTR 301
             + +  G+   + +G                                    VT  R   
Sbjct: 187 QTLWLERGVVRRAEFGFEKFPAWQDEVFAAEEAELARMNTRMRQEMHWLARGVTARRKRN 246

Query: 302 VGINTYLDGFLKEENIRFRKSPIVFEKRPPQDSTNRP-----LLLDYTDISKKLGDFSLN 356
           +G    L G   E     RKS ++   R    +T+       L+++  +++K  GD  + 
Sbjct: 247 MGRLRALQGLRSER--AERKSQVLAAGRQVNLATDSGDLSGRLVIEAENVTKAFGDKRIC 304

Query: 357 VN-GGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVT--GDVKVSYKPQYISS-D 412
            +   +I +G+ VG++GPNG GKTT ++ L G ++PD G V    +++ +Y  Q  ++ D
Sbjct: 305 QDFSTRILRGDRVGLIGPNGAGKTTLLRMLTGELAPDGGVVRLGTNLETAYFDQRRAALD 364

Query: 413 FEGTVEDLL---------MSITAIHTSYYKSEIIKPLALENILDSSVKDLSGGELQRVSI 463
            + +V D L         +  T  H   Y  +    L  E    + V+ LSGGE  R+ +
Sbjct: 365 PDKSVWDTLTDGRGDNVWVRGTPQHVVGYMKDF---LFSEAQARTPVRALSGGERNRLLL 421

Query: 464 AACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRF 523
           A  L++ ++L ++DEP+  LD+E    T  ++  +  + +  + VV HD  F D +    
Sbjct: 422 AKLLAKPSNLLILDEPTNDLDME----TLDLLEEVLADYDGTLLVVSHDRDFLDRLVTSV 477

Query: 524 IVFSGIAGSS---GTGSEPLQKR 543
           I   G A  S   G  S+ L++R
Sbjct: 478 IAVEGDAEVSEYVGGYSDYLRQR 500



 Score = 56.6 bits (135), Expect = 3e-12
 Identities = 47/172 (27%), Positives = 74/172 (43%), Gaps = 28/172 (16%)

Query: 362 IYQGEVVGILGPNGIGKTTFVKALAGVISPDSGE--VTGDVKVSYKPQ-----------Y 408
           + +G+   ++G NG GK+T +K LAG I PDSGE  V     ++  PQ           Y
Sbjct: 29  VAKGDKTCLVGRNGSGKSTLLKVLAGEILPDSGERFVQPGASIAVLPQDPIILAPTIADY 88

Query: 409 ISSDFEGTVEDLLMSITAIHTSYYKSEIIKPLALENILDSSVKDLSGGELQRVSIAACLS 468
           ++        D +  + A+  +        P+A           LSGGE +R ++A  L 
Sbjct: 89  VAQGLPPAERDQMYRVDAVLDAVGIDGARDPVA-----------LSGGEGRRAALARALV 137

Query: 469 QDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYIS 520
              D  L+DEP+  LD    L T   +         A+ ++ HD  F + +S
Sbjct: 138 GQPDALLLDEPTNHLD----LPTILWLEEWLSSYGGALVMISHDRRFLETVS 185