Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 911 a.a., ribosome-associated ATPase/putative transporter RbbA from Escherichia coli ECRC62

 Score = 90.5 bits (223), Expect = 3e-22
 Identities = 102/493 (20%), Positives = 210/493 (42%), Gaps = 44/493 (8%)

Query: 97  PRDGVTGLLGPNGVGKSTIIKALSGEMVLNL-NDLTETPDMKKVLDYFSGTELQNYFEK- 154
           P   + GL+GP+GVGKS+++  +SG  V+   N +    DM+             +  + 
Sbjct: 36  PARCMVGLIGPDGVGKSSLLSLISGARVIEQGNVMVLGGDMRDPRHRRDACPRIAWMPQG 95

Query: 155 LKNNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDRTFDQLS 214
           L  N    +   + VD   ++      E   +++E      ++ +  ++   DR   +LS
Sbjct: 96  LGKNLYHTLSVYENVDFFARLFGHDKAEREVRINE------LLTSTGLAPFRDRPAGKLS 149

Query: 215 GGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVL 274
           GG  Q++ +  A + + ++   DEPT+ +D   R     +I  + + +  ++V   L+  
Sbjct: 150 GGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRAQFWDLIDSIRQRQSNMSV---LVAT 206

Query: 275 DYLSDYIHIMYGIPSAYGVVTHPRGTRVGINTYLDGFLKEENI--------RFRKSPIVF 326
            Y+ +     + +    G V    G+   +         EE          R     +V 
Sbjct: 207 AYMEEAERFDWLVAMNAGEVL-ATGSAEELRQQTQSATLEEAFINLLPQAQRQAHQAVVI 265

Query: 327 EKRPPQDSTNRPLLLDYTDISKKLGDF-SLNVNGGQIYQGEVVGILGPNGIGKTTFVKAL 385
              PP    N  + ++  D++ + G F +++    +I +GE+ G LG NG GK+T +K L
Sbjct: 266 ---PPYQPENAEIAIEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKML 322

Query: 386 AGVISPDSGEV--------TGDVKVSYKPQYISSDFEGTVEDLLMSITAIHTSYYK---- 433
            G++    GE           D+    +  Y+S  F    E  +     +H   +     
Sbjct: 323 TGLLPASEGEAWLFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEA 382

Query: 434 ------SEIIKPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQ 487
                 +E+ +   L ++ D   + L  G  QR+S+A  +    ++ ++DEP++ +D   
Sbjct: 383 EIPARVAEMSERFKLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVA 442

Query: 488 RLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIVFSGIAGSSGTGSEPLQKRAGAN 547
           R    +++  ++ + +  +F+  H +   +      ++ +G   +SGT  E ++KR  A+
Sbjct: 443 RDMFWQLMVDLSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTPQELVEKRGAAS 502

Query: 548 KFLKEMGITFRRD 560
             L+E  I + ++
Sbjct: 503 --LEEAFIAYLQE 513