Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 637 a.a., ABC transporter ATP-binding protein from Escherichia coli ECRC62

 Score = 90.1 bits (222), Expect = 2e-22
 Identities = 120/482 (24%), Positives = 195/482 (40%), Gaps = 98/482 (20%)

Query: 103 GLLGPNGVGKSTIIKALSGEMVLNLNDLT------------ETPDMKKV-LDY------- 142
           GL+G NG GKST++  L  E+  +    T            ETP + +  L+Y       
Sbjct: 31  GLVGKNGCGKSTLLALLKNEISADGGSYTFPGSWQLAWVNQETPALPQAALEYVIDGDRE 90

Query: 143 FSGTELQNYFEKLKNNG--IKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINAL 200
           +   E Q +    +N+G  I  IH             GK+ + +     +     +++ L
Sbjct: 91  YRQLEAQLHDANERNDGHAIATIH-------------GKL-DAIDAWSIRSRAASLLHGL 136

Query: 201 EISNI-LDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVA 259
             SN  L+R     SGG   R+ +A A +   D+   DEPT+ LD+       K ++   
Sbjct: 137 GFSNEQLERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQ 196

Query: 260 EGKKVVAVEHDLIVLDYLSD-YIHI----MYGIPSAYGVVTHPRGTRVG----------- 303
               ++ + HD   LD + D  IHI    M+     Y      R TR+            
Sbjct: 197 G--TLILISHDRDFLDPIVDKIIHIEQQSMFEYTGNYSSFEVQRATRLAQQQAMYESQQE 254

Query: 304 ----INTYLDGF------LKEENIRFRK-------------SPIVFEKRPPQDSTNRPLL 340
               + +Y+D F       K+   R +              +P  F  R P+   N   L
Sbjct: 255 RVAHLQSYIDRFRAKATKAKQAQSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNP--L 312

Query: 341 LDYTDISKKLGDF----SLNVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEV 396
           L    +S   GD     S+ +N   +  G  +G+LG NG GK+T +K LAG ++P SGE+
Sbjct: 313 LKMEKVSAGYGDRIILDSIKLN---LVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEI 369

Query: 397 --TGDVKVSYKPQYISSDFEGTVEDLLMSITAIHTSYYKSEIIKPLALENILDSSVKD-- 452
                +K+ Y  Q+   ++    E  +  +  +     + ++   L         V +  
Sbjct: 370 GLAKGIKLGYFAQH-QLEYLRADESPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEET 428

Query: 453 --LSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVD 510
              SGGE  R+ +A  + Q  +L L+DEP+  LD++ R    + +     E E A+ VV 
Sbjct: 429 RRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMR----QALTEALIEFEGALVVVS 484

Query: 511 HD 512
           HD
Sbjct: 485 HD 486



 Score = 53.1 bits (126), Expect = 3e-11
 Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 23/183 (12%)

Query: 103 GLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLKNNGIKP 162
           GLLG NG GKST+IK L+GE+     ++     +K  L YF+    Q+  E L+ +   P
Sbjct: 342 GLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIK--LGYFA----QHQLEYLRADE-SP 394

Query: 163 IHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDRTFDQLSGGELQRVA 222
           I       + P+ ++ K+ + L     +G+            + + T  + SGGE  R+ 
Sbjct: 395 IQ--HLARLAPQELEQKLRDYLGGFGFQGD-----------KVTEET-RRFSGGEKARLV 440

Query: 223 IAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDYLSDYIH 282
           +A    +  ++   DEPT+ LD+  R +  + + E  EG  VV V HD  +L   +D ++
Sbjct: 441 LALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIEF-EGALVV-VSHDRHLLRSTTDDLY 498

Query: 283 IMY 285
           +++
Sbjct: 499 LVH 501



 Score = 52.8 bits (125), Expect = 4e-11
 Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 39/198 (19%)

Query: 362 IYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVT--GDVKVSYKPQ------------ 407
           I  G+ VG++G NG GK+T +  L   IS D G  T  G  ++++  Q            
Sbjct: 24  INPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGSWQLAWVNQETPALPQAALEY 83

Query: 408 YISSDFE--------------------GTVEDLLMSITAIHTSYYKSEIIKPLALEN-IL 446
            I  D E                     T+   L +I A       + ++  L   N  L
Sbjct: 84  VIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQL 143

Query: 447 DSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAM 506
           +  V D SGG   R+++A  L   +DL L+DEP+  LD++  +   + ++      +  +
Sbjct: 144 ERPVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLK----SYQGTL 199

Query: 507 FVVDHDILFQDYISDRFI 524
            ++ HD  F D I D+ I
Sbjct: 200 ILISHDRDFLDPIVDKII 217