Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 636 a.a., ATPase components of ABC transporters with duplicated ATPase domains from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  102 bits (253), Expect = 6e-26
 Identities = 116/487 (23%), Positives = 197/487 (40%), Gaps = 71/487 (14%)

Query: 104 LLGPNGVGKSTIIKAL-------SGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLK 156
           L+G NG GKST++K +        GE+ +N    T       V +  + T  Q  F    
Sbjct: 36  LVGINGAGKSTLMKIIMGMEIPDEGEVAINQGIKTAYVHQNPVFEA-NLTIYQTLFSDSS 94

Query: 157 NNGIKPIHKPQYVDVLPKVVKGKVGEL---------LKKVDEKGEFEKIINALEISNILD 207
           +  +K I   Q   +  +  K    EL         L+  D + + ++++  L + +  D
Sbjct: 95  SEPLKAIEAYQKAMLAAESGKDNADELNGIMEKMDRLQAWDFEYQIKEVLGKLGLHDT-D 153

Query: 208 RTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVK--------------------- 246
                LSGG+ +RVA+A A L + D+   DEPT+ LD+K                     
Sbjct: 154 LPVGNLSGGQRKRVALAKAILEKPDLLLLDEPTNHLDLKTIEWLEDYLSKANLSLFMVTH 213

Query: 247 QRFSAAKVIREVAE---GKKVVAVEHDLIVLDYLSDYIHIMYG----IPSAYG-----VV 294
            R+   KV  E+ E   GK      +    LD  ++   +         S Y      + 
Sbjct: 214 DRYFLEKVTNEILELDAGKIYRYTGNYSYFLDKKAERREVEASEQEKAKSLYKKELEWIR 273

Query: 295 THPRGTRVGINTYLDGFLKEENIRFRKSPIVFEKRPPQDSTNRPL---LLDYTDISKKLG 351
             P+         +D F   +   F++     E+      + + L   +++   + K+ G
Sbjct: 274 RQPKARGTKAKYRVDAFEATKEKAFQRKE---EREVALQVSAKRLGGKIIELEKLFKRYG 330

Query: 352 DFSLNVNGGQIYQ-GEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGDVKVS---YKPQ 407
           D  +  +    ++ G+ +GI+GPNG GKTTF+  L G + PDSG++T     +   Y+ +
Sbjct: 331 DKRIVSDFSYTFKKGDKIGIVGPNGAGKTTFLNMLTGTLKPDSGDITIGQTTAFGYYRQE 390

Query: 408 YISSDFEGTVEDLLMSITAIHTSYYKSEIIKPLALENI------LDSSVKDLSGGELQRV 461
             S D    + DL+  +  + T    S I     L           + +  LSGGE +R+
Sbjct: 391 EHSFDESKRLIDLVKEVAEVVTLSNGSTITASQFLNQFGFPPKQQHTPISKLSGGEKRRL 450

Query: 462 SIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISD 521
            +   L +  +  ++DEP+  LD+     T   +    +     M +V HD  F D + D
Sbjct: 451 QLLMVLIKTPNFLILDEPTNDLDI----VTLNTLEDFLEYFPGCMIIVSHDRYFMDRLVD 506

Query: 522 RFIVFSG 528
              VF G
Sbjct: 507 HIFVFQG 513



 Score = 62.0 bits (149), Expect = 7e-14
 Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 49/227 (21%)

Query: 341 LDYTDISKKLGDFSL--NVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEV-- 396
           L    +SK  GD  L   ++ G I QG+ + ++G NG GK+T +K + G+  PD GEV  
Sbjct: 6   LSVEKLSKSFGDKPLFHQISFG-IDQGQKIALVGINGAGKSTLMKIIMGMEIPDEGEVAI 64

Query: 397 TGDVKVSYKPQYISSDFEGTVEDLLMS--------------------------------- 423
              +K +Y  Q    +   T+   L S                                 
Sbjct: 65  NQGIKTAYVHQNPVFEANLTIYQTLFSDSSSEPLKAIEAYQKAMLAAESGKDNADELNGI 124

Query: 424 ------ITAIHTSYYKSEIIKPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLID 477
                 + A    Y   E++  L L +  D  V +LSGG+ +RV++A  + +  DL L+D
Sbjct: 125 MEKMDRLQAWDFEYQIKEVLGKLGLHD-TDLPVGNLSGGQRKRVALAKAILEKPDLLLLD 183

Query: 478 EPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFI 524
           EP+  LD    L T   +     +   ++F+V HD  F + +++  +
Sbjct: 184 EPTNHLD----LKTIEWLEDYLSKANLSLFMVTHDRYFLEKVTNEIL 226



 Score = 44.7 bits (104), Expect = 1e-08
 Identities = 42/185 (22%), Positives = 77/185 (41%), Gaps = 21/185 (11%)

Query: 103 GLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLKNNGIKP 162
           G++GPNG GK+T +  L+G +  +  D+T              T    Y+ + +++  + 
Sbjct: 349 GIVGPNGAGKTTFLNMLTGTLKPDSGDIT-----------IGQTTAFGYYRQEEHSFDES 397

Query: 163 IHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDRT-FDQLSGGELQRV 221
                 V  + +VV    G  +          + +N          T   +LSGGE +R+
Sbjct: 398 KRLIDLVKEVAEVVTLSNGSTITA-------SQFLNQFGFPPKQQHTPISKLSGGEKRRL 450

Query: 222 AIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDYLSDYI 281
            +    ++  +    DEPT+ LD+    +  +   E   G  ++ V HD   +D L D+I
Sbjct: 451 QLLMVLIKTPNFLILDEPTNDLDI-VTLNTLEDFLEYFPGCMII-VSHDRYFMDRLVDHI 508

Query: 282 HIMYG 286
            +  G
Sbjct: 509 FVFQG 513