Pairwise Alignments
Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2
Subject, 559 a.a., ATP-binding cassette protein, ChvD family from Echinicola vietnamensis KMM 6221, DSM 17526
Score = 107 bits (266), Expect = 2e-27
Identities = 130/498 (26%), Positives = 214/498 (42%), Gaps = 84/498 (16%)
Query: 103 GLLGPNGVGKSTIIKALSGE-----------------MVLNLNDLTETPDMKKVLD--YF 143
G+LG NG GKS+++K ++G M+ +L +K+V++
Sbjct: 38 GVLGLNGSGKSSLLKIIAGMDTEYQGEVAWSSGYSVGMLEQEPELDPEKTVKEVVEEAVA 97
Query: 144 SGTELQNYFEKLKNNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFE------KII 197
L FE++ + P D + K+++ K GE+ +K+D +E K +
Sbjct: 98 ETVGLLKEFEEINEKFMDPAVMED-PDAMNKLIE-KQGEVQEKLDAANAWELDVVLDKAM 155
Query: 198 NALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIRE 257
+AL + D + LSGGE +RVA+ L+E D+ DEPT+ LD + + +++
Sbjct: 156 DALRLPPS-DAVVENLSGGEKRRVALCRLLLQEPDVLLLDEPTNHLDAESVHWLEQHLKQ 214
Query: 258 VAEGKKVVAVEHDLIVLDYLSDYIHIM---YGIP--SAYGVVTHPRGTRVGINTYLDG-- 310
V+AV HD LD ++ +I + GIP Y + R+ +
Sbjct: 215 YKG--TVIAVTHDRYFLDNVAGWILELDRGEGIPWKGNYSSWLDQKQKRLAQEEKSESKR 272
Query: 311 --FLKEENIRFRKSPIV-----------FEKRPPQDSTNRPLLLD-YTDISKKLGDFSLN 356
L+ E + +P +EK +D+ R L+ Y +LG +
Sbjct: 273 QKTLERELEWIKMTPKAKQAKGKARLNAYEKLVGEDAKERESKLELYIPPGPRLGSKVIE 332
Query: 357 VNGGQ---------------IYQGEVVGILGPNGIGKTTFVKALAGVISPDSG--EVTGD 399
VNG + QG +VGI+GPNG GK+T K + G PD+G EV
Sbjct: 333 VNGVSKSYGDKLLFEDLTFALPQGGIVGIIGPNGAGKSTLFKLITGNEKPDAGSFEVGET 392
Query: 400 VKVSYKPQ-YISSDFEGTV--------EDLLMSITAIHTSYYKSEIIKPLALENILDSSV 450
V+++Y Q + D + TV E++ + ++ Y S+ + + + V
Sbjct: 393 VQLAYVDQEHDRLDADKTVYQTISEGNENIKLGAKEMNARAYVSKFNFSGSDQ---EKKV 449
Query: 451 KDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVD 510
LSGGE RV +A L ++ +L L+DEP+ LDV T R + + V+
Sbjct: 450 GVLSGGERNRVHLALTLKENGNLLLLDEPTNDLDV----NTLRSLEEALENFGGCAVVIS 505
Query: 511 HDILFQDYISDRFIVFSG 528
HD F D I + F G
Sbjct: 506 HDRWFLDRICTHILAFEG 523
Score = 53.9 bits (128), Expect = 2e-11
Identities = 65/280 (23%), Positives = 117/280 (41%), Gaps = 62/280 (22%)
Query: 363 YQGEVVGILGPNGIGKTTFVKALAGVISPDSGEV--TGDVKVSYKPQYISSDFEGTVED- 419
+ G +G+LG NG GK++ +K +AG+ + GEV + V Q D E TV++
Sbjct: 32 FYGAKIGVLGLNGSGKSSLLKIIAGMDTEYQGEVAWSSGYSVGMLEQEPELDPEKTVKEV 91
Query: 420 ----------LLMSITAIHTSYYKSEIIK-PLALENIL---------------------- 446
LL I+ + +++ P A+ ++
Sbjct: 92 VEEAVAETVGLLKEFEEINEKFMDPAVMEDPDAMNKLIEKQGEVQEKLDAANAWELDVVL 151
Query: 447 ------------DSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRV 494
D+ V++LSGGE +RV++ L Q+ D+ L+DEP+ LD E +
Sbjct: 152 DKAMDALRLPPSDAVVENLSGGEKRRVALCRLLLQEPDVLLLDEPTNHLDAE----SVHW 207
Query: 495 IRRMADEKEAAMFVVDHDILFQDYISDRFIVF---SGI--AGSSGTGSEPLQKR-AGANK 548
+ + + + + V HD F D ++ + GI G+ + + QKR A K
Sbjct: 208 LEQHLKQYKGTVIAVTHDRYFLDNVAGWILELDRGEGIPWKGNYSSWLDQKQKRLAQEEK 267
Query: 549 FLKEMGITFRRDPD----TGRPRVNKEGSQRDVYQKEIGE 584
+ T R+ + T + + K ++ + Y+K +GE
Sbjct: 268 SESKRQKTLERELEWIKMTPKAKQAKGKARLNAYEKLVGE 307
Score = 53.1 bits (126), Expect = 3e-11
Identities = 50/195 (25%), Positives = 83/195 (42%), Gaps = 20/195 (10%)
Query: 97 PRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLK 156
P+ G+ G++GPNG GKST+ K ++G E PD + G +Q + +
Sbjct: 354 PQGGIVGIIGPNGAGKSTLFKLITGN---------EKPDAGS---FEVGETVQLAYVDQE 401
Query: 157 NNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDRTFDQLSGG 216
++ + K Y + K+G K+++ + K + + ++ LSGG
Sbjct: 402 HDRLDA-DKTVYQTISEGNENIKLGA--KEMNARAYVSKFNFS---GSDQEKKVGVLSGG 455
Query: 217 ELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDY 276
E RV +A G++ DEPT+ LDV S + + G V + HD LD
Sbjct: 456 ERNRVHLALTLKENGNLLLLDEPTNDLDVNTLRSLEEALENF--GGCAVVISHDRWFLDR 513
Query: 277 LSDYIHIMYGIPSAY 291
+ +I G Y
Sbjct: 514 ICTHILAFEGDSQVY 528