Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 911 a.a., ribosome-associated ATPase: ATP-binding protein/ATP-binding membrane protein from Escherichia coli BL21

 Score = 90.5 bits (223), Expect = 3e-22
 Identities = 102/495 (20%), Positives = 210/495 (42%), Gaps = 48/495 (9%)

Query: 97  PRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLT----ETPDMKKVLDYFSGTELQNYF 152
           P   + GL+GP+GVGKS+++  +SG  V+   ++     +  D K   D           
Sbjct: 36  PARCMVGLIGPDGVGKSSLLSLISGARVIEQGNVMVLGGDMRDPKHRRDVCPRIAWMP-- 93

Query: 153 EKLKNNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDRTFDQ 212
           + L  N    +   + VD   ++      E   +++E      ++ +  ++   DR   +
Sbjct: 94  QGLGKNLYHTLSVYENVDFFARLFGHDKAEREVRINE------LLTSTGLAPFRDRPAGK 147

Query: 213 LSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAEGKKVVAVEHDLI 272
           LSGG  Q++ +  A + + ++   DEPT+ +D   R     +I  + + +  ++V   L+
Sbjct: 148 LSGGMKQKLGLCCALIHDPELLILDEPTTGVDPLSRSQFWDLIDSIRQRQSNMSV---LV 204

Query: 273 VLDYLSDYIHIMYGIPSAYGVVTHPRGTRVGINTYLDGFLKEENI--------RFRKSPI 324
              Y+ +     + +    G V    G+   +         EE          R     +
Sbjct: 205 ATAYMEEAERFDWLVAMNAGEVL-ATGSAEELRQQTQSATLEEAFINLLPQAQRQAHQAV 263

Query: 325 VFEKRPPQDSTNRPLLLDYTDISKKLGDF-SLNVNGGQIYQGEVVGILGPNGIGKTTFVK 383
           V    PP    N  + ++  D++ + G F +++    +I +GE+ G LG NG GK+T +K
Sbjct: 264 VI---PPYQPENAEIAIEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMK 320

Query: 384 ALAGVISPDSGEV--------TGDVKVSYKPQYISSDFEGTVEDLLMSITAIHTSYYK-- 433
            L G++    GE           D+    +  Y+S  F    E  +     +H   +   
Sbjct: 321 MLTGLLPASEGEAWLFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIP 380

Query: 434 --------SEIIKPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDV 485
                   +E+ +   L ++ D   + L  G  QR+S+A  +    ++ ++DEP++ +D 
Sbjct: 381 EAEIPARVAEMSERFKLNDVEDILPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDP 440

Query: 486 EQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIVFSGIAGSSGTGSEPLQKRAG 545
             R    +++  ++ + +  +F+  H +   +      ++ +G   +SGT  E ++KR  
Sbjct: 441 VARDMFWQLMVDLSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTPQELVEKRGA 500

Query: 546 ANKFLKEMGITFRRD 560
           A+  L+E  I + ++
Sbjct: 501 AS--LEEAFIAYLQE 513