Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 646 a.a., ABC transporter ATP-binding protein uup from Alteromonas macleodii MIT1002

 Score = 95.9 bits (237), Expect = 5e-24
 Identities = 119/511 (23%), Positives = 222/511 (43%), Gaps = 99/511 (19%)

Query: 94  LITPRDGVTGLLGPNGVGKSTIIKALSGEMVLN---------------LNDLTETPDMKK 138
           ++ P++ V  L+G NG GKST++K ++G+++ +                 D  +T D+  
Sbjct: 25  VVQPKERVC-LVGRNGSGKSTLMKVIAGDIIADDGQRIIENNTVIARLEQDPPQTTDVT- 82

Query: 139 VLDYFS------GTELQNYFEKLKNNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKG- 191
           + DY +      G  L+ YF + +  G  P                K+  L ++++ +  
Sbjct: 83  LFDYVAEGLSDVGETLKAYFHQTRIVGEDPSESNL----------NKLQRLQEQLEARDA 132

Query: 192 -EFEKIINALEISNILDR--TFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQ- 247
            +FE+ I        LD   +   LSGG  ++ A+A A +R+ D+   DEPT+ LD++  
Sbjct: 133 WQFEQQIEQTLTMLKLDPEISLSTLSGGWRRKAALARALVRQPDLLLLDEPTNHLDIEMI 192

Query: 248 RFSAAKVIREVAEGKKVVAVEHDLIVLDYLSDYI-----HIMYGIPSAYGVVT----HPR 298
           R+  + +         +V V HD   +  ++  I       +   P  Y        H  
Sbjct: 193 RWLESSLSNYQGA---IVFVSHDRAFIRAMATRIIDLDRGSVTSYPGNYETYLEKKQHDL 249

Query: 299 GTRVGINTYLDGFLKEENI---------------RFRKSPIVFEKRPPQDSTNRPLLLDY 343
                 N   D  L +E +               R R    + E+R  + +     +++ 
Sbjct: 250 EVEASQNAEFDKKLAQEEVWIRQGIKARRTRNEGRVRALKKLREERKARRAVQGNAVVNQ 309

Query: 344 TDISK------KLGDFSLNVNGGQIYQG--------EVVGILGPNGIGKTTFVKALAGVI 389
              ++      ++ D S ++ G  I +G        + + ++GPNG GK+T +K L G +
Sbjct: 310 HQGARSGKMVFEVKDLSYSIEGKPIVEGLNLNVLRGDKLALIGPNGSGKSTLIKLLLGEL 369

Query: 390 SPDSGEVT--GDVKVSYKPQYISS-DFEGTV--------EDLLMSITAIHT-SYYKSEII 437
            PDSG      +++V+Y  Q+    D E +V         DL+++    H  SY +  + 
Sbjct: 370 QPDSGNCKQGTNLEVAYFDQHRHGLDLEKSVIDAVGDGKRDLMVNGHPRHVISYLQDYLF 429

Query: 438 KPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRR 497
            P      +++ VK LSGGE  R+ +A  + + +++ ++DEP+  LDVE    T  ++  
Sbjct: 430 TP----ERVNAPVKSLSGGEKNRLMLAKLMLKPSNVLVLDEPTNDLDVE----TLEMLET 481

Query: 498 MADEKEAAMFVVDHDILFQDYISDRFIVFSG 528
           + +E    + +V HD  F D +++  +VF G
Sbjct: 482 LLNEYTGTVLLVSHDREFVDNVANSSVVFEG 512