Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 496 a.a., sugar ABC transporter ATPase from Agrobacterium fabrum C58

 Score = 91.3 bits (225), Expect = 9e-23
 Identities = 119/449 (26%), Positives = 192/449 (42%), Gaps = 71/449 (15%)

Query: 104 LLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLKNN-GIKP 162
           L G NG GKST+IK ++G            P+    L YF G  +      L  + GI+ 
Sbjct: 37  LAGENGCGKSTVIKVITG---------VYKPESDAEL-YFDGKPIAAMTPTLAQSLGIQV 86

Query: 163 IHKP----QYVDVLPKV-----VKGKVGELLKKVDEKGEFEKIINALEISNILDRTFDQL 213
           I +       + V   +     V G+ G L+ K   K   EK +  L +S  LDR   +L
Sbjct: 87  IWQDLALFDEMTVAENIGFQYAVNGRFG-LVDKRAIKNAAEKALARLGVSFDLDRPLKEL 145

Query: 214 SGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREV-AEGKKVVAVEHDLI 272
              + Q VAIA A + E  + + DEPT+ L   +      ++R + A G  VV V H L 
Sbjct: 146 PIAQRQIVAIARALVGEARLVFMDEPTASLTQSETDYLIDIVRNLSASGVAVVFVSHRLA 205

Query: 273 VLDYLSDYIHIMYGIPSAYGVVTHPRGTRVGINTYLDGFLKEENIRFRKSPIVFEKRPPQ 332
            +  +SD I ++    S  GV      T+  +   + G       R   S ++       
Sbjct: 206 EVLEISDRITVLRD-GSLVGVFPVEGMTQSRVTELMTG-------RNFDSAVI-----AA 252

Query: 333 DSTNRPLLLDYTDISK--KLGDFSLNVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVIS 390
           D  ++P++L    +++  +  D S ++      +GE +GI G  G G+T     L G+  
Sbjct: 253 DHDDKPVVLSVRGLTRAGEFEDVSFDLR-----RGETLGITGLLGAGRTELALTLFGMHR 307

Query: 391 PDSGEVTGDVK--------------VSY-----------KPQYISSDFEGTVEDLLMSIT 425
           P SGEV  D K              V+Y           +PQ I+ +      D L+S  
Sbjct: 308 PQSGEVLIDGKKVDFHSNRDAIRVGVAYLSEDRLSLGLNQPQSIADNLVMASLDKLLSGG 367

Query: 426 AIHTSYYKSEI---IKPLALE-NILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSA 481
            I TS     +   I  L ++  + +  ++ LSGG  QRV+IA  L+    + ++D P+ 
Sbjct: 368 LISTSKKADVVSRWISALGVKIGLPEDPIRTLSGGNQQRVAIAKWLAIGPKILILDAPTV 427

Query: 482 FLDVEQRLTTSRVIRRMADEKEAAMFVVD 510
            +DV  R     ++R++A E  + + + D
Sbjct: 428 GVDVGARAGIFEIVRKLAAEGLSIIVISD 456



 Score = 48.1 bits (113), Expect = 8e-10
 Identities = 53/190 (27%), Positives = 83/190 (43%), Gaps = 26/190 (13%)

Query: 361 QIYQGEVVGILGPNGIGKTTFVKALAGVISPDS-----------GEVTGDVKVSYKPQYI 409
           ++  GEV  + G NG GK+T +K + GV  P+S             +T  +  S   Q I
Sbjct: 28  EVNPGEVHCLAGENGCGKSTVIKVITGVYKPESDAELYFDGKPIAAMTPTLAQSLGIQVI 87

Query: 410 SSDF----EGTVEDLLMSITAIHTSY-------YKSEIIKPLALENI---LDSSVKDLSG 455
             D     E TV + +    A++  +        K+   K LA   +   LD  +K+L  
Sbjct: 88  WQDLALFDEMTVAENIGFQYAVNGRFGLVDKRAIKNAAEKALARLGVSFDLDRPLKELPI 147

Query: 456 GELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILF 515
            + Q V+IA  L  +A L  +DEP+A L   +      ++R ++    A +F V H +  
Sbjct: 148 AQRQIVAIARALVGEARLVFMDEPTASLTQSETDYLIDIVRNLSASGVAVVF-VSHRLAE 206

Query: 516 QDYISDRFIV 525
              ISDR  V
Sbjct: 207 VLEISDRITV 216