Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 925 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score = 97.8 bits (242), Expect = 2e-24
 Identities = 96/452 (21%), Positives = 193/452 (42%), Gaps = 57/452 (12%)

Query: 97  PRDGVTGLLGPNGVGKSTIIKALSGEMVL----------NLNDLTETPDMKKVLDYFSGT 146
           P   + GL+GP+GVGKS+++  +SG   +          +++D     D    + Y    
Sbjct: 41  PAGRMIGLIGPDGVGKSSLLSLISGARAIQKGNVEVLAGDMSDPRHREDTCPRIAYMP-- 98

Query: 147 ELQNYFEKLKNNGIKPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNIL 206
                 + L  N    +   + +D   ++  G+ G      + K    +++ +  +    
Sbjct: 99  ------QGLGKNLYPTLSVFENIDFFGRLF-GQDGR-----ERKARIAELLKSTGLERFA 146

Query: 207 DRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAEGKKVVA 266
           DR   +LSGG  Q++ +  A + + D+   DEPT+ +D   R    ++I  +  G+  ++
Sbjct: 147 DRPAMKLSGGMKQKLGLCCALIHDPDLLILDEPTTGVDPLSRRQFWELIDSIRAGRPGMS 206

Query: 267 VEHDLIVLDYLS-----DYIHIMYG---IPSAYGVVTHPRGTRVGINTYLDGFLKEENIR 318
           V   ++   Y+      D++  M G   + +        R +   ++      L EE   
Sbjct: 207 V---IVATAYMEEAAGFDWLVAMDGGKILATGSPGELLERTSTANLDAAFIALLPEEK-- 261

Query: 319 FRKSPIVFEKRPPQDSTNRPLLLDYTDISKKLGDFSLNVN-GGQIYQGEVVGILGPNGIG 377
            RK        P + + +    ++ + +S + GDF+   N   +I +GE+ G LG NG G
Sbjct: 262 -RKDYHEVHIAPRRVTHDGDYAIEASHLSMRFGDFTAVDNVSFKIPRGEIFGFLGSNGCG 320

Query: 378 KTTFVKALAGVISPDSGEV--------TGDVKVSYKPQYISSDFEGTVEDLLMSITAIHT 429
           K+T +K L G+++   GE           D+ + ++  Y+S  F    E  +     +H 
Sbjct: 321 KSTTMKMLTGLLAASEGEAKLFGHKVDASDMAIRHRVGYMSQAFSLYSELTVRQNLDLHA 380

Query: 430 SYYK----------SEIIKPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEP 479
             +K          +E+ +   L  ++D+   DL  G  QR+S+A  +    D+ ++DEP
Sbjct: 381 RLFKLPEATIQPRIAEMAERFDLGTVMDTLPDDLPLGIRQRLSLAVAMIHSPDILILDEP 440

Query: 480 SAFLDVEQRLTTSRVIRRMADEKEAAMFVVDH 511
           ++ +D   R    +++  ++      +F+  H
Sbjct: 441 TSGVDPVARDGFWQILADLSRNDNVTIFISTH 472



 Score = 56.2 bits (134), Expect = 6e-12
 Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 22/146 (15%)

Query: 361 QIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEV---TGDV-----------KVSYKP 406
           +I  G ++G++GP+G+GK++ +  ++G  +   G V    GD+           +++Y P
Sbjct: 39  EIPAGRMIGLIGPDGVGKSSLLSLISGARAIQKGNVEVLAGDMSDPRHREDTCPRIAYMP 98

Query: 407 QYISSDFEGTVEDL--------LMSITAIHTSYYKSEIIKPLALENILDSSVKDLSGGEL 458
           Q +  +   T+           L            +E++K   LE   D     LSGG  
Sbjct: 99  QGLGKNLYPTLSVFENIDFFGRLFGQDGRERKARIAELLKSTGLERFADRPAMKLSGGMK 158

Query: 459 QRVSIAACLSQDADLYLIDEPSAFLD 484
           Q++ +   L  D DL ++DEP+  +D
Sbjct: 159 QKLGLCCALIHDPDLLILDEPTTGVD 184