Pairwise Alignments

Query, 590 a.a., ribosome biogenesis/translation initiation ATPase RLI from Methanococcus maripaludis S2

Subject, 551 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score = 98.2 bits (243), Expect = 8e-25
 Identities = 109/489 (22%), Positives = 203/489 (41%), Gaps = 86/489 (17%)

Query: 101 VTGLLGPNGVGKSTIIKAL-----------SGEMVLNLNDLTETPDMKKVLDYFSGTELQ 149
           +  L+G +G GK+TI   L            G + +   D+ +  +M++      GT++ 
Sbjct: 37  IVALIGESGSGKTTIALTLMGYARPGCRISGGSVTVAGRDMVQLSEMERAK--IRGTKI- 93

Query: 150 NYFEKLKNNGIKPIHKPQYVDVLPKVVK-GKVGELLKKVDEKGEFEKIINALEISN---I 205
           +Y  +       P  K     ++ +V++  ++ +L+   + +    ++  AL + N   I
Sbjct: 94  SYVPQSAAAAFNPAQK-----IIDQVIEVTRIHDLMPPQEARRRAVELFKALSLPNPETI 148

Query: 206 LDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTSWLDVKQRFSAAKVIREVAE--GKK 263
            +R   Q+SGG+LQR++ A A +   ++  FDEPT+ LDV  +    +  +      G  
Sbjct: 149 GERYPHQVSGGQLQRLSAAMALIGNPELVIFDEPTTALDVTTQIEVLRAFKSAMRKGGIG 208

Query: 264 VVAVEHDLIVLDYLSDYIHIMYGIPSAYGVVTHPRGTRVGINTYLDGFLKEENIRFRKSP 323
            V V HDL V+  ++D I ++ G     G +     T   +      + +E    F    
Sbjct: 209 GVYVSHDLAVVAQIADRIVVLKG-----GEIQETGTTTDILENAQHPYTRELLTAFNDK- 262

Query: 324 IVFEKRPPQDSTNRPLLLDYTDISKKLGDFSLNVNGGQ------------IYQGEVVGIL 371
            V    P + +  +PLL    DI K +  +    +               +Y G  +GI+
Sbjct: 263 -VRTVAPLKQNGAKPLL----DIEKLIAGYGTKGDDHMPLVRAVDSVSLAVYPGRNLGII 317

Query: 372 GPNGIGKTTFVKALAGVISPDSGEVTGDVKVSYKPQYISSDFEGTVEDLLMSI------- 424
           G +G GK+T  +A+AG++   SG V       ++ + + +D      D L  +       
Sbjct: 318 GESGCGKSTLARAIAGILPAASGHVI------FEGRQLDADARRRTSDQLRRMQIVFQYA 371

Query: 425 -TAIHTSYYKSEII-KPLALENILDSSVKD-----------------------LSGGELQ 459
            TA++ +    +I+ +PLA  + L    +D                       LSGG+ Q
Sbjct: 372 DTALNPAKSIEDILGRPLAFYHSLKGKARDARIDQLLDMVKLPRSVRHRHPSGLSGGQKQ 431

Query: 460 RVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYI 519
           RV+ A  L+ +  L + DE ++ LD         ++  +  E   +   + HD+   + I
Sbjct: 432 RVNFARALAAEPSLIICDEITSALDTVVAAAIIDLLGELQRELNLSYIFISHDLSVVESI 491

Query: 520 SDRFIVFSG 528
            D  +V  G
Sbjct: 492 CDEIVVMYG 500



 Score = 70.5 bits (171), Expect = 2e-16
 Identities = 57/200 (28%), Positives = 86/200 (43%), Gaps = 33/200 (16%)

Query: 362 IYQGEVVGILGPNGIGKTTFVKALAGVISP----DSGEVT-----------------GDV 400
           I +GE+V ++G +G GKTT    L G   P      G VT                    
Sbjct: 32  IAEGEIVALIGESGSGKTTIALTLMGYARPGCRISGGSVTVAGRDMVQLSEMERAKIRGT 91

Query: 401 KVSYKPQYISSDFEGT--VEDLLMSITAIHTSYYKSE-------IIKPLALEN---ILDS 448
           K+SY PQ  ++ F     + D ++ +T IH      E       + K L+L N   I + 
Sbjct: 92  KISYVPQSAAAAFNPAQKIIDQVIEVTRIHDLMPPQEARRRAVELFKALSLPNPETIGER 151

Query: 449 SVKDLSGGELQRVSIAACLSQDADLYLIDEPSAFLDVEQRLTTSRVIRRMADEKEAAMFV 508
               +SGG+LQR+S A  L  + +L + DEP+  LDV  ++   R  +    +       
Sbjct: 152 YPHQVSGGQLQRLSAAMALIGNPELVIFDEPTTALDVTTQIEVLRAFKSAMRKGGIGGVY 211

Query: 509 VDHDILFQDYISDRFIVFSG 528
           V HD+     I+DR +V  G
Sbjct: 212 VSHDLAVVAQIADRIVVLKG 231